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Pull requests: cellarium-ai/cellarium-ml

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Pull requests list

scvi: allow injection of categorical covariates without batch
#345 opened Aug 29, 2025 by sjfleming Loading…
scVI big run config
#331 opened Aug 7, 2025 by sjfleming Loading…
3
Implement dataloader h5ad reading in backed mode
#325 opened Jul 28, 2025 by sjfleming • Draft
1
11
Spatial dataloader project enhancement New feature or request
#323 opened Jul 18, 2025 by sjfleming Loading…
1
@sambatsy
1
scvi: merge unit tests into Lys branch
#319 opened Jul 3, 2025 by LysSanzMoreta Loading…
1
CellariumCLI awaiting review
#314 opened Apr 18, 2025 by ordabayevy Loading…
CellariumGPT Yerdos branch
#313 opened Apr 18, 2025 by ordabayevy • Draft
1
NMF loading amortization
#307 opened Apr 3, 2025 by sjfleming • Draft
Refactor and expand onepass model
#300 opened Feb 5, 2025 by sjfleming • Draft
8 of 10 tasks
2
2
[IGNORE] mb cellarium gpt predict
#293 opened Jan 29, 2025 by mbabadi Loading…
Automatically add lightning hooks to CellariumModule as passthroughs
#271 opened Nov 26, 2024 by sjfleming Loading…
1
8
Add if TYPE_CHECKING clauses for type imports discussion type hints
#248 opened Oct 6, 2024 by ordabayevy • Draft
2
CellariumGPT
#238 opened Sep 19, 2024 by ordabayevy Loading…
Python 3.8 compatible CellariumGPT
#234 opened Aug 22, 2024 by ordabayevy Loading…
DDPNoParametersStrategy discussion enhancement New feature or request
#209 opened Jul 4, 2024 by ordabayevy • Draft
Non-negative matrix factorization
#196 opened May 31, 2024 by sjfleming • Draft
1 of 3 tasks
Implement contrastive learning model and transforms
#195 opened May 31, 2024 by bricewang • Draft
@bricewang
13
scVI
#135 opened Mar 13, 2024 by sjfleming • Draft
23
CellariumGPT awaiting response
#129 opened Mar 7, 2024 by ordabayevy Loading…
15
fsspec low priority refactor WIP
#88 opened Sep 28, 2023 by ordabayevy Loading…
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