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api/python/cellxgene_census
tools/cellxgene_census_builder
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lines changed Original file line number Diff line number Diff line change @@ -32,7 +32,7 @@ dependencies= [
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# ensure that the assets are readable (tiledbsoma supports backward compatible reading).
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# Make sure this version does not fall behind the builder's tiledbsoma version.
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# TODO (spatial): Pin tiledbsoma dependency to an actual released version after tiledbsoma spatial code has been released
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- " tiledbsoma @ git+https://github.com/single-cell-data/TileDB-SOMA.git@16f481f #egg=tiledbsoma&subdirectory=apis/python/" ,
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+ " tiledbsoma @ git+https://github.com/single-cell-data/TileDB-SOMA.git@fc5f8e7 #egg=tiledbsoma&subdirectory=apis/python/" ,
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" anndata" ,
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" numpy>=1.21,<2.0" ,
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" requests" ,
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# The compatibility matrix is defined here:
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# https://github.com/TileDB-Inc/TileDB/blob/dev/format_spec/FORMAT_SPEC.md
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# TODO (spatial): Pin tiledbsoma dependency to an actual released version after tiledbsoma spatial code has been released
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- " tiledbsoma @ git+https://github.com/single-cell-data/TileDB-SOMA.git@16f481f #egg=tiledbsoma&subdirectory=apis/python/" ,
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+ " tiledbsoma @ git+https://github.com/single-cell-data/TileDB-SOMA.git@fc5f8e7 #egg=tiledbsoma&subdirectory=apis/python/" ,
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# TODO (spatial): Uncomment line below to install "cellxgene-census" at an appropriate version when tiledbsoma spatial code has been released
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# "cellxgene-census==1.12.0",
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" cellxgene-ontology-guide==0.6.1" ,
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