Codex evaluation fixes, remove local file access, update results#25
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- Update experiment notebooks with latest analysis - Update pyproject.toml and uv.lock dependencies - Remove obsolete figure files (exp1_*, exp2_*, failure_categories_*) - Update .gitignore to exclude results/compare_models/ and scripts/ 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Major changes: - Update metacoder dependency to codex-disable-shell-tool branch - Add disable_shell_tool: true to all Codex eval configs - Rerun Experiment 1 (Codex) with MCP-only mode (38% pass rate) - Rerun Experiment 2 (cross-model) with MCP-only mode: - gpt-5.1-codex-max: 54% - gpt-5.1-codex: 52% - gpt-5.1-codex-mini: 50% - Update notebooks to use new result files - Regenerate all figures with corrected data - Remove old result files that had filesystem access (cheating) Key finding: Model size has minimal effect (4pp spread) when filesystem access is disabled, vs 11pp spread before. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
Ruff does not understand Jupyter notebook cell execution order, so it reports undefined name errors for variables that are defined in earlier cells. This is a false positive for notebooks. 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
- Add missing outputs field to code cells (notebook schema fix) - Remove unused f-string placeholders (ruff F541) - Other auto-fixes from ruff --fix 🤖 Generated with [Claude Code](https://claude.com/claude-code) Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
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Summary
disable_shell_tool: trueto enforce MCP-only modeTest plan