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FeatureRequest: Feature selection - pass a list of blocklist features rather than a file #544

@MikeLippincott

Description

@MikeLippincott

Feature type

  • Add new functionality

  • Change existing functionality

General description of the proposed functionality

Instead of passing through a file for blocklist features add the capability to pass through a list of blocklist features.

Feature example

pycytominer.feature_select.feature_select(profiles, features='infer', image_features=False, samples='all', operation='variance_threshold', output_file=None, output_type='csv', na_cutoff=0.05, corr_threshold=0.9, corr_method='pearson', freq_cut=0.05, unique_cut=0.01, compression_options=None, float_format=None, blocklist_file=None, outlier_cutoff=500, noise_removal_perturb_groups=None, noise_removal_stdev_cutoff=None)

change the types for blocklist_file=None to accept lists too

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