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documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

Bug

#373 In czbiohub-sf/iohub;

· talonchandler opened on Feb 10, 2026

iohub convert fails due to chunk size constraints

Status: Open.

#367 In czbiohub-sf/iohub;

· ieivanov opened on Jan 27, 2026

Migrate to the <code>src</code> Layout

maintenanceMaintenance workMaintenance work

Status: Open.

Task

#364 In czbiohub-sf/iohub;

· srivarra opened on Jan 21, 2026

Keep track of original MM position name in zarr metadata

enhancementNew feature or requestNew feature or request

Status: Open.

#354 In czbiohub-sf/iohub;

· ieivanov opened on Nov 26, 2025

Define how omero["name"] should be used

Status: Open.

Bug

#353 In czbiohub-sf/iohub;

· ieivanov opened on Nov 26, 2025

Zarr Precreation O(n) bug

Status: Open.

#349 In czbiohub-sf/iohub;

· gav-sturm opened on Nov 5, 2025

Bump supported python ranges

CIContinuous integrationContinuous integration

maintenanceMaintenance workMaintenance work

Status: Open.

#342 In czbiohub-sf/iohub;

· ziw-liu opened on Oct 11, 2025

Stop using patched fork for sphinx-polyversion

CIContinuous integrationContinuous integration

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#341 In czbiohub-sf/iohub;

· ziw-liu opened on Sep 24, 2025

Reader type True TypeError

bugSomething isn't workingSomething isn't working

μManagerMicro-Manager files and metadataMicro-Manager files and metadata

Status: Open.

#339 In czbiohub-sf/iohub;

· ahillsley opened on Sep 18, 2025

Test against ome-zarr-models-py 1.0

CIContinuous integrationContinuous integration

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

Status: Open.

#338 In czbiohub-sf/iohub;

· ziw-liu opened on Sep 16, 2025

·  

0.3.0

Zarr-python 3 cannot read old data with empty channels

bugSomething isn't workingSomething isn't working

NGFFOME-NGFF (OME-Zarr format)OME-NGFF (OME-Zarr format)

upstreamIssues with upstream dependenciesIssues with upstream dependencies

Status: Open.

#335 In czbiohub-sf/iohub;

· ziw-liu opened on Sep 12, 2025

·  

0.3.0

CI improvements

CIContinuous integrationContinuous integration

enhancementNew feature or requestNew feature or request

Status: Open.

#333 In czbiohub-sf/iohub;

· ziw-liu opened on Sep 10, 2025