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v0.8.1 #647

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@i-jey
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@i-jey i-jey commented Sep 29, 2025 •
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Changelog

  • Summary report updates
  • Add Rosenthal/Conrad Lab as a site option
  • Add feature to read default sample type from an environment variable (DEFAULT_SAMPLE_TYPE)
  • Disable site selection when DEFAULT_SITE has been set as an environment variable

i-jey and others added 30 commits September 10, 2025 15:09
@i-jey
only attempt to save qc results if the qc np file is created successf…
d83e564 
…ully
@i-jey
Merge pull request #644 from czbiohub-sf/qc-results-saving-edge-case-…
130fe12 
…bugfix

QC results saving bugfix
@mwlkhoo
Change summary report to include % breakdown
d9c39e5
@mwlkhoo
Working report generation
7f20fda
@mwlkhoo
remove print statements
72783a9
@mwlkhoo
Working parasitemia compensation and minor text edit for cleanliness
092e755
@mwlkhoo
Autoformat
5f7f723
@mwlkhoo
Fix type hint
a072a65
@mwlkhoo
Remove unnecessary imports
a88b19c
@mwlkhoo
Merge pull request #645 from czbiohub-sf/summary-columns
0aee10a 
Summary columns
@NicholasBratvold
Add 'Rosenthal Lab' to lab list
05c7b4d
@i-jey
add the option to specify the default sample type as an environment v…
915e0b1 
…ariable, which will set which option the form defaults to in oracle
@NicholasBratvold
Rename 'Rosenthal Lab' to 'Rosenthal/Conrad Lab'
1ebfb57
@i-jey
Merge pull request #646 from czbiohub-sf/rosenthal_lab
dffc705 
Add 'Rosenthal Lab' to lab list
@i-jey
Merge pull request #648 from czbiohub-sf/default_sample_type
e6a2abc 
Option to specify default sample type
@i-jey
If a DEFAULT_SITE has been set as an environment variable, disable …
25ac017 
…location selection in the form
@i-jey
Merge pull request #649 from czbiohub-sf/disable-site-selection-if-de…
6a883c7 
…fault-set

If default site set, disable site selection in form
@i-jey
Add study form definition, dropdown selection, and additional metadat…
517ef1e 
…a fields to the form
@i-jey
typo
8468475
@i-jey
update example toml
70bdeff
@i-jey
Add option for multiple selection datatype
4820d6f
@i-jey
add option to select multiple choices
802aeb0
@i-jey
Merge pull request #651 from czbiohub-sf/study-form
a43d617 
Study form
@i-jey
Explicitly close the study form dialog
8af9028
@i-jey
Additional validation and guards against invalid inputs
02317a4
@i-jey
Update example toml
145cf6d
@i-jey
use .get convention for field key
b88bed3
@i-jey
Merge pull request #654 from czbiohub-sf/update-study-form-csv
593394c 
Update study form csv
@i-jey
Remove commas and non-digits from the text prior to float cast
99b2611
@i-jey
Merge pull request #655 from czbiohub-sf/comma_numeric_validation
249d95f 
Remove commas and non-digits from the text prior to float cast
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3 participants

@i-jey @mwlkhoo @NicholasBratvold