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fix: prevent broadcasting errors in r2_score using da.where() #1013

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May 10, 2025
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19 changes: 7 additions & 12 deletions dask_ml/metrics/regression.py
Original file line number Diff line number Diff line change
Expand Up @@ -162,18 +162,13 @@ def r2_score(
numerator = (weight * (y_true - y_pred) ** 2).sum(axis=0, dtype="f8")
denominator = (weight * (y_true - y_true.mean(axis=0)) ** 2).sum(axis=0, dtype="f8")

nonzero_denominator = denominator != 0
nonzero_numerator = numerator != 0
valid_score = nonzero_denominator & nonzero_numerator
output_chunks = getattr(y_true, "chunks", [None, None])[1]
output_scores = da.ones([y_true.shape[1]], chunks=output_chunks)
with np.errstate(all="ignore"):
output_scores[valid_score] = 1 - (
numerator[valid_score] / denominator[valid_score]
)
output_scores[nonzero_numerator & ~nonzero_denominator] = 0.0

result = output_scores.mean(axis=0)
score = da.where(
numerator == 0,
1.0,
da.where(denominator != 0, 1 - numerator / denominator, 0.0),
)

result = score.mean(axis=0)
if compute:
result = result.compute()
return result
Expand Down
16 changes: 16 additions & 0 deletions tests/metrics/test_regression.py
Original file line number Diff line number Diff line change
Expand Up @@ -116,3 +116,19 @@ def test_regression_metrics_do_not_support_weighted_multioutput(metric_pairs):

with pytest.raises((NotImplementedError, ValueError), match=error_msg):
_ = m1(a, b, multioutput=weights)


def test_r2_score_with_different_chunk_patterns():
"""Test r2_score with different chunking configurations."""
# Create arrays with compatible but different chunk patterns
a = da.random.uniform(size=(100,), chunks=25) # 4 chunks
b = da.random.uniform(size=(100,), chunks=20) # 5 chunks
result = dask_ml.metrics.r2_score(a, b)
assert isinstance(result, float)
# Create arrays with different chunk patterns
a_multi = da.random.uniform(size=(100, 3), chunks=(25, 3)) # 4 chunks
b_multi = da.random.uniform(size=(100, 3), chunks=(20, 3)) # 5 chunks
result_multi = dask_ml.metrics.r2_score(
a_multi, b_multi, multioutput="uniform_average"
)
assert isinstance(result_multi, float)
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