v2.2.0-beta

Release notes

This is a quiet release to mark progress.
Big items include a new AI/BI dashboard displaying key facets of the DICOM index object_catalog, Vista3D model install & inferencing, CICD fixes, VLM based DE-ID, local DICOM file viewing for OHIF and TCIA data set downloader.

What's Changed

• Improve/Fix CICD w/ Github Actions @erinaldidb in #87
• Add reference architecture diagram by @dmoore247 in #92
• Metadata Anonymizer with FF3 and DICOGNITO by @erinaldidb in #88
• Simplify MONAI serving integration w/ cookie generation by @erinaldidb in #96
• Update setup.cfg @erinaldidb in #97
• CICD fixes by @michael-saltzman-databricks in #100
• MONAI Vista3D - Model Integration by @erinaldidb in #101
• Add PresidioTransformer and corresponding DE-ID experiment notebooks by @dmoore247 in #102
• OHIF Viewer - Local file browser and async optimization by @erinaldidb in #106
• Fix on the MONAILabel server url to the right cookie path by @erinaldidb in #109
• Add AI/BI Pixels Dashboard by @dmoore247 in #110
• User token for sql and files resources by @erinaldidb in #112
• Deprecate thumbnail column and viewer by @dmoore247 in #116
• Add TCIA MIDI-B Download and Verifier notebooks by @dmoore247 in #117
• Added VLMTransformer to do PHI detection using VLMs by @yenlow in #111
• PyTests Teardown Fix by @erinaldidb in #119
• MONAI Label - Bundles compatibility by @erinaldidb in #120
• remove "dbfs:" from image file paths by @yenlow in #130
• lint fix by @michael-saltzman-databricks in #134
• Update CONTRIBUTING.md, adding coding standards by @dmoore247 in #136

New Contributors

• @michael-saltzman-databricks made their first contribution in #100
• @yenlow made their first contribution in #111

Full Changelog: 2.0.0...2.2.0

2.0.0

New Features

• Serverless and Serving Endpoint compatibility
• NVIDIA's MONAI framework with Databricks compatibility layer
• Incremental processing with spark structured streaming and autoloader
• Automatic zip extraction
• Compatibility with UC Volumes
• OHIF Viewer with Databricks compatibility layer

MONAI integrations

• Model wrapper for MONAILabel to serve as PyFunc ML Model usable in Serving Endpoints
• MONAILabelTransformer to call MONAILabel server in a serving endpoint
• MONAILabel server instructions to notebook 05-Monailabel.py
• A new example to create a custom model with user-defined labels in notebook 05-Monailabel.py
• New workflow example to use pixels with serving endpoints
• MONAILabel radiology app and model creation under monailabel_model folder
• MONAILabel in serving endpoint connectivity to the lakehouse app

Others

• Added SQL statements to create Pixels' tables with optimal configuration during the initialization of the Catalog class
• Added deep parameter in DicomMetaExtractor for optimization purposes, set it as false to avoid scanning dicom pixel data during metadata extraction
• Fixed governance notebook sample
• Fixed RUNME
• Code cleanup using check style
• Removed unnecessary notebooks

Full Changelog: 0.0.6...2.0.0

Intial public release

This version was released publicly to databricks-industry-solutions/pixels with blog and demo.

New Contributors

• @dmoore247 made their first contribution in #1
• @dbbnicole made their first contribution in #2

Full Changelog: https://github.com/databricks-industry-solutions/pixels/commits/0.0.6