Merge latest upstream changes #14
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…e-fix Fix incorrect framerate when loading bidirectional SBX files
Numpy 2.0 compatibility: change all np.Inf to np.inf
…cleanup_movie cleanup movie
…volpy_qt6 Addresses flatironinstitute#1454 using pyside6
fix: Resolve Python Logger warnings
…ix_to_ndarray Convert all uses of np.matrix to np.ndarray, handling API diffs
…simplify_getsn caiman.source_extraction.cnmf.deconvolution.GetSn(): Simplify phrasing of code
…p_shape np.shape(obj) to obj.shape
… improve readability
Fix incorrect nr calculating
…add_str_repr_and_access_to_onacid Add str, repr, and getitem to onacid
…s: correct arguments and put them in good order. Also clean up some imports
…OnACID_no_return_and_docs_fixes OnACID, CNMF, other cleanups
Dev to main for release 1.12.2
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This PR pulls the upstream changes while retaining our changes to save results to a user-defined output directory.