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Jonah fixes #205

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4586a3a
fix typo in heading code (credit to Jonah)
calebweinreb Mar 11, 2025
a83f62c
make explicit the requirement to reload model after re-indexing (cred…
calebweinreb Mar 11, 2025
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4 changes: 2 additions & 2 deletions docs/keypoint_moseq_colab.ipynb
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Expand Up @@ -460,7 +460,7 @@
"metadata": {},
"source": [
"```{warning}\n",
"Reindexing is only applied to the checkpoint file. Therefore, if you perform this step after extracting the modeling results or generating vizualizations, then those steps must be repeated.\n",
"Reindexing is only applied to the checkpoint file, so you must re-load the checkpoint before proceeding to extract results. Furthermore, if you perform this step after extracting the modeling results or generating vizualizations, then those steps must be repeated.\n",
"```"
]
},
Expand Down Expand Up @@ -490,7 +490,7 @@
"metadata": {},
"outputs": [],
"source": [
"# load the most recent model checkpoint\n",
"# load the most recent model checkpoint (which in this case has also been reindixed)\n",
"model, data, metadata, current_iter = kpms.load_checkpoint(project_dir, model_name)\n",
"\n",
"# extract results\n",
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2 changes: 1 addition & 1 deletion docs/source/FAQs.rst
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Expand Up @@ -318,7 +318,7 @@ Below we provide two code recipes to get around these issues. The first recipe i

.. code-block:: python

heading = {k: np.zeros_like(v) for k in heading.items()}
heading = {k: np.zeros_like(v) for k,v in heading.items()}


Why are there only trajectory plots for a subset of syllables?
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