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{bio,tools}[foss/2025b] CellBender v0.4.0, pyro-ppl v1.9.1 w/ CUDA 12.9.1 - #26777

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pavelToman:20260902150350_new_pr_CellBender040
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{bio,tools}[foss/2025b] CellBender v0.4.0, pyro-ppl v1.9.1 w/ CUDA 12.9.1#26777
pavelToman wants to merge 2 commits into
easybuilders:developfrom
pavelToman:20260902150350_new_pr_CellBender040

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@pavelToman pavelToman commented Sep 2, 2026

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(created using eb --new-pr)
resolves vscentrum/vsc-software-stack#666

…ppl-1.9.1-foss-2025b-CUDA-12.9.1.eb and patches: CellBender-0.4.0_fix-version.patch
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Test report by @pavelToman
SUCCESS
Build succeeded for 2 out of 2 (total: 22 mins 20 secs) (2 easyconfigs in total)
node3901.accelgor.os - Linux RHEL 9.6, x86_64, AMD EPYC 7413 24-Core Processor, 1 x NVIDIA NVIDIA A100-SXM4-80GB, 595.71.05, Python 3.9.21
See https://gist.github.com/pavelToman/7c50917925344b6b58ac63913db17321 for a full test report.

@pavelToman pavelToman added the AI-assisted AI-assisted contributions label Sep 2, 2026
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boegel commented Sep 2, 2026

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@boegelbot please test @ jsc-zen3-a100

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@boegel: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=26777 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_26777 --ntasks=8 --partition=jsczen3g --gres=gpu:1 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 11409

Test results coming soon (I hope)...

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it is of no use to you (unless you think I have a bug, which I don't).

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CellBender

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