Updating to v.1.6.4

- Added a warning about a bug in MAFFT v7.525

Author: edgardomortiz

README.md

@@ -44,6 +44,8 @@ or
 mamba create --platform osx-64 -n captus -c bioconda -c conda-forge captus megahit=1.2.9=hfbae3c0_0 mmseqs2=16.747c6
 ```
 
+**WARNING**: MAFFT v7.525 has a bug that has been corrected in v7.526, consider adding to the commands above `mafft=7.526`
+
 Then check that `Captus` was correctly installed:
 
 ```shell
@@ -56,7 +58,7 @@ If the program was correctly installed, you will see the following help message:
 ```text
 usage: captus command [options]
 
-Captus 1.6.3: Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
+Captus 1.6.4: Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
 
 Captus-assembly commands:
   command     Program commands (in typical order of execution)

captus/version.py

@@ -14,4 +14,4 @@
 not, see <http://www.gnu.org/licenses/>.
 """
 
-__version__ = "1.6.3a"
+__version__ = "1.6.4"

docs/content/assembly/_index.md

@@ -24,7 +24,7 @@ To show the main help of the `captus_assembly` module just type `captus --help`:
 (captus)$ captus --help
 usage: captus command [options]
 
-Captus 1.6.3: Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
+Captus 1.6.4: Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
 
 Captus-assembly commands:
   command     Program commands (in typical order of execution)
@@ -59,4 +59,4 @@ captus extract --help
 
 ___
 Created by [Edgardo M. Ortiz]({{< ref "../../more/credits/#edgardo-m-ortiz">}}) (06.08.2021)<br>
-Last modified by [Edgardo M. Ortiz]({{< ref "../../more/credits/#edgardo-m-ortiz">}}) (02.21.2026)
+Last modified by [Edgardo M. Ortiz]({{< ref "../../more/credits/#edgardo-m-ortiz">}}) (02.23.2026)

docs/content/basics/installation.md

@@ -45,7 +45,7 @@ If the program was correctly installed, you will see the following help message:
 ```console
 usage: captus command [options]
 
-Captus 1.6.3: Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
+Captus 1.6.4: Assembly of Phylogenomic Datasets from High-Throughput Sequencing data
 
 Captus-assembly commands:
   command     Program commands (in typical order of execution)
@@ -124,4 +124,4 @@ git clone https://github.com/edgardomortiz/Captus.git
 
 ___
 Created by [Edgardo M. Ortiz]({{< ref "../more/credits/#edgardo-m-ortiz">}}) (06.08.2021)<br>
-Last modified by [Edgardo M. Ortiz]({{< ref "../../more/credits/#gentaro-shigita">}}) (02.21.2026)
+Last modified by [Edgardo M. Ortiz]({{< ref "../../more/credits/#gentaro-shigita">}}) (02.22.2026)