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update filename column type #91

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Merged
melissarklein merged 2 commits into from
Jul 24, 2025
Merged

update filename column type #91

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84c4c59
update filename column type
melissarklein Jul 24, 2025
010059b
Github Action: Joined modules and converted to json-ld data model
github-actions[bot] Jul 24, 2025
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2 changes: 1 addition & 1 deletion EL.data.model.csv
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Original file line number Diff line number Diff line change
Expand Up @@ -151,7 +151,7 @@ valueReported,The count or gene count for the transcript,,,,True,ManifestColumn,
variantCount,The number of variants analysed in the discovery stage (after QC). Example - 52500,,,,True,ManifestColumn,,ManifestColumn,,ManifestColumn,False,STRING,"Sage Bionetworks, EMBL-EBI","A data contributor should be able to write in a name OR provide one of these values: Unknown Not collected, Not applicable, Not specified. ",Genotyping_Human
visitCode,"Indicate which longitudinal visit for the individual the data comes from, provided by the data contributor's data dictionary",,,,True,ManifestColumn,,ManifestColumn,,ManifestColumn,False,NUMBER,Sage Bionetworks, ,Individual_Human
Component,,,,,False,,,,,Unknown,False,,,,"assay_RNAseq_template,assay_bsSeq_template,assay_metabolomics_template,assay_metagenomics_template,assay_microbiome_template,assay_phenotype_human_template,assay_proteomics_template,assay_scRNAseq_template,assay_whole_genome_sequencing_template,biospecimen_human_template,biospecimen_non_human_template,file_annotation_template,genotyping_human_template,individual_human_template,individual_non_human_template,study_folder_template"
Filename,,,,,False,,,,,Unknown,False,,,,"assay_RNAseq_template,assay_bsSeq_template,assay_metabolomics_template,assay_metagenomics_template,assay_microbiome_template,assay_phenotype_human_template,assay_proteomics_template,assay_scRNAseq_template,assay_whole_genome_sequencing_template,biospecimen_human_template,biospecimen_non_human_template,file_annotation_template,genotyping_human_template,individual_human_template,individual_non_human_template"
Filename,,,,,False,,,,,Unknown,False,string,,,"assay_RNAseq_template,assay_bsSeq_template,assay_metabolomics_template,assay_metagenomics_template,assay_microbiome_template,assay_phenotype_human_template,assay_proteomics_template,assay_scRNAseq_template,assay_whole_genome_sequencing_template,biospecimen_human_template,biospecimen_non_human_template,file_annotation_template,genotyping_human_template,individual_human_template,individual_non_human_template"
accessReqs,,,,,False,,,,,Unknown,False,,,,study_folder_template
ackContext,,,,,False,,,,,Unknown,False,,,,study_folder_template
acknowledgment,,,,,False,,,,,Unknown,False,,,,study_folder_template
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2 changes: 1 addition & 1 deletion modules/Unknown/Filename.csv
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Original file line number Diff line number Diff line change
@@ -1,2 +1,2 @@
Attribute,Description,Valid Values,DependsOn,DependsOn Component,Required,Parent,Validation Rules,Properties,Source,module,multivalue,columnType,Ontology,Notes,UsedIn
Filename,,,,,,,,,,Unknown,,,,,"assay_RNAseq_template,assay_bsSeq_template,assay_metabolomics_template,assay_metagenomics_template,assay_microbiome_template,assay_phenotype_human_template,assay_proteomics_template,assay_scRNAseq_template,assay_whole_genome_sequencing_template,biospecimen_human_template,biospecimen_non_human_template,file_annotation_template,genotyping_human_template,individual_human_template,individual_non_human_template"
Filename,,,,,,,,,,Unknown,,string,,,"assay_RNAseq_template,assay_bsSeq_template,assay_metabolomics_template,assay_metagenomics_template,assay_microbiome_template,assay_phenotype_human_template,assay_proteomics_template,assay_scRNAseq_template,assay_whole_genome_sequencing_template,biospecimen_human_template,biospecimen_non_human_template,file_annotation_template,genotyping_human_template,individual_human_template,individual_non_human_template"