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HELM conversion produces an invalid CHEM attachment mapping when an atom from a monomer-uncovered fragment is connected to multiple recognized monomers

Status: Open.

Bug

#3917 In epam/Indigo;

· NadezhdaKatcman opened on Sep 17, 2026

Substructure matching ignores E/Z configuration for query molecules loaded from mol v3000 files

Status: Open.

Bug

#3914 In epam/Indigo;

· NadezhdaKatcman opened on Sep 15, 2026

IndigoException when handling HELM strings containing the psiU monomer

Priority: Low

Status: Open.

Bug

#3911 In epam/Indigo;

· zabackermit opened on Sep 9, 2026

Indigo.exactMatch() result depends on molecule arguments order

Priority: High

Status: Open.

Bug

#3910 In epam/Indigo;

· zabackermit opened on Sep 9, 2026

Patch Result SVG Glyph IDs

Status: Open.

#3882 In epam/Indigo;

· AlekseiKhariukov opened on Sep 4, 2026

Use Loaded Fonts to Render Text Using Font Manager

Status: Open.

#3881 In epam/Indigo;

· AlekseiKhariukov opened on Sep 4, 2026

Extend Indigo API to accept fonts

Status: Open.

#3880 In epam/Indigo;

· AlekseiKhariukov opened on Sep 4, 2026

Enable FreeType Support

Status: Open.

#3879 In epam/Indigo;

· AlekseiKhariukov opened on Sep 4, 2026

SubstructureMatcher doesn't see match in a query molecule with ABS stereo-label and the same molecule with AND or OR stereo-label instead of ABS

Status: Open.

Bug

#3874 In epam/Indigo;

· NadezhdaKatcman opened on Sep 2, 2026

Aromatization can produce stereochemical SMILES that Indigo cannot reload

Status: Open.

Bug

#3871 In epam/Indigo;

· rvaidya opened on Sep 2, 2026

Segmentation fault when expanding HELM with comma-separated monomers

Priority: Low

Status: Open.

Bug

#3869 In epam/Indigo;

· zabackermit opened on Sep 1, 2026

Change the definition of a chiral center

Draft

StereochemistryBucket: Stereochemistry related issuesBucket: Stereochemistry related issues

Status: Open.

Feature

#3853 In epam/Indigo;

· ljubica-milovic opened on Aug 21, 2026

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