Tests #52
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| name: Tests | |
| on: | |
| push: | |
| branches: [ main, master ] | |
| pull_request: | |
| branches: [ main, master ] | |
| schedule: | |
| - cron: '0 0 * * 0' # Weekly on Sundays | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| jobs: | |
| test: | |
| name: Python ${{ matrix.python-version }} on ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest] | |
| python-version: ['3.8', '3.9', '3.10', '3.11'] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e .[dev] | |
| - name: Run tests | |
| run: | | |
| python -m pytest tests/ -v --cov=fma_ions --cov-report=xml | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ./coverage.xml | |
| fail_ci_if_error: false | |
| - name: Run type checking | |
| run: | | |
| mypy fma_ions/ | |
| - name: Lint with flake8 | |
| run: | | |
| flake8 fma_ions/ | |
| - name: Check formatting with black | |
| run: | | |
| black --check fma_ions/ |