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KP_2PVR_adjCurveScale.m
KP_2PVR_adjCurveScale.m
 
 
KP_2PVR_analyze_first_order.m
KP_2PVR_analyze_first_order.m
 
 
KP_2PVR_analyze_superOrganizers_v4.m
KP_2PVR_analyze_superOrganizers_v4.m
 
 
KP_2PVR_apply_mask.m
KP_2PVR_apply_mask.m
 
 
KP_2PVR_apply_mask_singleTrialRes.m
KP_2PVR_apply_mask_singleTrialRes.m
 
 
KP_2PVR_assign_PFs_to_VRSectors_v2.m
KP_2PVR_assign_PFs_to_VRSectors_v2.m
 
 
KP_2PVR_bin_Space.m
KP_2PVR_bin_Space.m
 
 
KP_2PVR_bin_Time.m
KP_2PVR_bin_Time.m
 
 
KP_2PVR_binarize_spaceCov_v3.m
KP_2PVR_binarize_spaceCov_v3.m
 
 
KP_2PVR_calculate_InfoPerNeuron_v3.m
KP_2PVR_calculate_InfoPerNeuron_v3.m
 
 
KP_2PVR_calculate_popZScores.m
KP_2PVR_calculate_popZScores.m
 
 
KP_2PVR_calculate_preAndPert_zscoreCurves.m
KP_2PVR_calculate_preAndPert_zscoreCurves.m
 
 
KP_2PVR_calculate_preAndPert_zscoreCurves_forShuffles.m
KP_2PVR_calculate_preAndPert_zscoreCurves_forShuffles.m
 
 
KP_2PVR_calculate_zScores_v2.m
KP_2PVR_calculate_zScores_v2.m
 
 
KP_2PVR_circShift_activityPerTrial_v3.m
KP_2PVR_circShift_activityPerTrial_v3.m
 
 
KP_2PVR_condense_assemblies_v3.m
KP_2PVR_condense_assemblies_v3.m
 
 
KP_2PVR_convert_trialToEpochBased_sMask.m
KP_2PVR_convert_trialToEpochBased_sMask.m
 
 
KP_2PVR_correct_distToRef_for_sectorShift_v3.m
KP_2PVR_correct_distToRef_for_sectorShift_v3.m
 
 
KP_2PVR_create_field_organizer_v2.m
KP_2PVR_create_field_organizer_v2.m
 
 
KP_2PVR_create_multiAcq_field_organizer_v2.m
KP_2PVR_create_multiAcq_field_organizer_v2.m
 
 
KP_2PVR_filter_perturbAna_events.m
KP_2PVR_filter_perturbAna_events.m
 
 
KP_2PVR_filter_perturbAna_events_forShuffles.m
KP_2PVR_filter_perturbAna_events_forShuffles.m
 
 
KP_2PVR_find_antiAssemblies.m
KP_2PVR_find_antiAssemblies.m
 
 
KP_2PVR_find_antiLayer.m
KP_2PVR_find_antiLayer.m
 
 
KP_2PVR_find_assemblies_v3.m
KP_2PVR_find_assemblies_v3.m
 
 
KP_2PVR_find_candidatePlaceFields_singleTrialRes.m
KP_2PVR_find_candidatePlaceFields_singleTrialRes.m
 
 
KP_2PVR_find_candidatePlaceFields_v3.m
KP_2PVR_find_candidatePlaceFields_v3.m
 
 
KP_2PVR_find_preAndPert_significantSegments.m
KP_2PVR_find_preAndPert_significantSegments.m
 
 
KP_2PVR_find_preAndPert_significantSegments_forShuffles.m
KP_2PVR_find_preAndPert_significantSegments_forShuffles.m
 
 
KP_2PVR_generate_combinedMask.m
KP_2PVR_generate_combinedMask.m
 
 
KP_2PVR_generate_combinedMask_singleTrialRes.m
KP_2PVR_generate_combinedMask_singleTrialRes.m
 
 
KP_2PVR_generate_outliers_mask_v3.m
KP_2PVR_generate_outliers_mask_v3.m
 
 
KP_2PVR_generate_outliers_mask_v3_singleTrialRes.m
KP_2PVR_generate_outliers_mask_v3_singleTrialRes.m
 
 
KP_2PVR_generate_sectorMask_v3.m
KP_2PVR_generate_sectorMask_v3.m
 
 
KP_2PVR_generate_spaceCov_controls.m
KP_2PVR_generate_spaceCov_controls.m
 
 
KP_2PVR_generate_spatialStructure_mask.m
KP_2PVR_generate_spatialStructure_mask.m
 
 
KP_2PVR_generate_unmerge_fields_mask_v2.m
KP_2PVR_generate_unmerge_fields_mask_v2.m
 
 
KP_2PVR_load_borders_sectors.m
KP_2PVR_load_borders_sectors.m
 
 
KP_2PVR_loop_fineQuant_v4.m
KP_2PVR_loop_fineQuant_v4.m
 
 
KP_2PVR_loop_obtain_borders_sectors.m
KP_2PVR_loop_obtain_borders_sectors.m
 
 
KP_2PVR_loop_obtain_neuron_histories.m
KP_2PVR_loop_obtain_neuron_histories.m
 
 
KP_2PVR_lowPass.m
KP_2PVR_lowPass.m
 
 
KP_2PVR_map_fieldHistIDsOrgToSMAP.m
KP_2PVR_map_fieldHistIDsOrgToSMAP.m
 
 
KP_2PVR_merge_2PVR.m
KP_2PVR_merge_2PVR.m
 
 
KP_2PVR_obtain_SMAP_trials_per_neuron.m
KP_2PVR_obtain_SMAP_trials_per_neuron.m
 
 
KP_2PVR_obtain_TMAP_trials_per_neuron.m
KP_2PVR_obtain_TMAP_trials_per_neuron.m
 
 
KP_2PVR_obtain_avSMAPs_autocorrelation.m
KP_2PVR_obtain_avSMAPs_autocorrelation.m
 
 
KP_2PVR_obtain_borders_subAcqs.m
KP_2PVR_obtain_borders_subAcqs.m
 
 
KP_2PVR_obtain_control_SMAP_trials.m
KP_2PVR_obtain_control_SMAP_trials.m
 
 
KP_2PVR_obtain_corridorMerged2PVR.m
KP_2PVR_obtain_corridorMerged2PVR.m
 
 
KP_2PVR_obtain_extAssemblies_and_extPairs.m
KP_2PVR_obtain_extAssemblies_and_extPairs.m
 
 
KP_2PVR_obtain_field_distToRef_multiAcq_organizer.m
KP_2PVR_obtain_field_distToRef_multiAcq_organizer.m
 
 
KP_2PVR_obtain_field_distToRef_multiAcq_organizer_singleTrialRe.m
KP_2PVR_obtain_field_distToRef_multiAcq_organizer_singleTrialRe.m
 
 
KP_2PVR_obtain_field_histories_v3.m
KP_2PVR_obtain_field_histories_v3.m
 
 
KP_2PVR_obtain_neuron_histories.m
KP_2PVR_obtain_neuron_histories.m
 
 
KP_2PVR_obtain_numFields.m
KP_2PVR_obtain_numFields.m
 
 
KP_2PVR_obtain_org_diff_distrib.m
KP_2PVR_obtain_org_diff_distrib.m
 
 
KP_2PVR_obtain_pairs_from_triangles.m
KP_2PVR_obtain_pairs_from_triangles.m
 
 
KP_2PVR_obtain_perturbAna_events.m
KP_2PVR_obtain_perturbAna_events.m
 
 
KP_2PVR_obtain_perturbAna_events_forShuffles.m
KP_2PVR_obtain_perturbAna_events_forShuffles.m
 
 
KP_2PVR_obtain_preAndPertIDs.m
KP_2PVR_obtain_preAndPertIDs.m
 
 
KP_2PVR_obtain_preAndPertIDs_forShuffles.m
KP_2PVR_obtain_preAndPertIDs_forShuffles.m
 
 
KP_2PVR_obtain_spaceBorders2PFrames.m
KP_2PVR_obtain_spaceBorders2PFrames.m
 
 
KP_2PVR_obtain_spaceCoverageMap.m
KP_2PVR_obtain_spaceCoverageMap.m
 
 
KP_2PVR_obtain_timeBorders2PFrames.m
KP_2PVR_obtain_timeBorders2PFrames.m
 
 
KP_2PVR_prep_subAcqs_v2.m
KP_2PVR_prep_subAcqs_v2.m
 
 
KP_2PVR_rank_MAPs_v3.m
KP_2PVR_rank_MAPs_v3.m
 
 
KP_2PVR_report_neuronsForAnatomy.m
KP_2PVR_report_neuronsForAnatomy.m
 
 
KP_2PVR_select_significantPlaceFields_singleTrialRes.m
KP_2PVR_select_significantPlaceFields_singleTrialRes.m
 
 
KP_2PVR_select_significantPlaceFields_v2.m
KP_2PVR_select_significantPlaceFields_v2.m
 
 
KP_2PVR_view_organizer_v3.m
KP_2PVR_view_organizer_v3.m
 
 
LICENSE
LICENSE
 
 
README.md
README.md
 
 
RF_2PVR_peakdetect.m
RF_2PVR_peakdetect.m
 
 

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Analysis of two-photon calcium imaging data recorded from head-fixed adult zebrafish behaving in a virtual reality environment (Kim Palacios-Flores)

Neuronal activity cross-referenced with logged behaviour and virtual reality data was analyzed using custom software written in MATLAB.

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