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Creating a global config file

georgkempf edited this page Jul 23, 2021 · 1 revision

This is intended for installation on a shared system.

Create a new file in RosEM-main/rosem/config and add the following lines:

[GLOBAL]
rosetta_path=/path/to/rosetta/bin
phenix_path=/path/to/phenix/build
queue_submission_template=/path/to/template
queue_submission=<submission_command> (e.g. sbatch for SLURM, qsub for SGE)
queue_cancel=<cancel_command> (e.g. scancel for SLURM, qdel for SGE)

run python setup.py install

in RosEM-main to install the global configurations.

Users must keep "use global configuration" checked in the settings dialog.

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