Welcome to the repo for GA4GH Quality Control of Whole Genome Sequencing metrics and reference implementations (QC of WGS workgroup). These docs are written using mkdocs, themed with readthedocs for Mkdocs, and hosted using GitHub Pages.
View the rendered documentation at https://ga4gh.github.io/quality-control-wgs/.
The documentation is stored in the /docs folder, with a subfolder corresponding to standards definition, implementations and benchmarking. The main text content for each specifation can be found in these files:
- Metric definitions: /docs/metrics_definitions/README.md
- Reference Implementions: /docs/implementations/README.md
- Implementions Benchmarking: /docs/benchmark_resources/README.md
To contribute, edit the files in the docs subdirectory. Please submit any changes for review via PR or Discussions.
This project has a Google Group/mailing list for those interested in contributing to development of the stadard or following akong with progress. Please reach out to [email protected] for more information.
