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GCC 2026 microgalaxy#4129

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bebatut merged 7 commits into
galaxyproject:mainfrom
paulzierep:gcc-microbiome
Jul 24, 2026
Merged

GCC 2026 microgalaxy#4129
bebatut merged 7 commits into
galaxyproject:mainfrom
paulzierep:gcc-microbiome

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@paulzierep

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@paulzierep

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@Minamehr maybe add a figure of your talk ? or poster screenshot ?
@bebatut good for you ?

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Mina Hojat Ansari presented **Galaxy-based workflows for genome-resolved and multi-kingdom microbiome analysis: application to the nasal microbiome in Alzheimer's disease**, demonstrating a comprehensive metagenomic analysis framework applied to 93 individuals (Alzheimer's disease patients, mild cognitive impairment, and healthy controls), leveraging the FAIRyMAGs workflow for genome-resolved analysis including diagnosis-level co-assembly.

A poster introduced the **Galaxy Communities Dock (CoDex)** ([GitHub](https://github.com/galaxyproject/galaxy_codex)), a centralized, manually curated repository that aggregates community-specific tools, workflows, and tutorials with automatic weekly updates. By combining technical infrastructure with human curation, CoDex supports communities in surfacing their most relevant resources and serves as a key element for **Labs** — user-friendly interfaces enabling communities to rapidly identify and launch resources without programming expertise.

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The poster can be found here: https://f1000research.com/posters/15-1115


Paul Zierep and Bérénice Batut presented **FAIRyMAGs: A Modular, FAIR-Compliant Galaxy Workflow Suite for Flexible and Scalable Metagenome-Assembled Genome Reconstruction** ([Zenodo](https://zenodo.org/records/21128145)), a FAIR-compliant modular workflow suite for generating and analyzing MAGs, supported by the ELIXIR BFSP programme.

<p align="center"><img src="images/paul-zierep-fairymags-talk.jpg" alt="Paul Zierep presenting FAIRyMAGs at GCC2026" width="50%"/></p>

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Please add the license credit

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sorry what is license credit ?

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The license for the picture is CC BY 4.0: https://flic.kr/p/2smXXyt. So you need to mention that I am the author of it

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is this not covered by: Paul Zierep and Bérénice Batut presented .. ? sorry I am really not sure, like where should I put it ?

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No, the credit for the picture itself goes to the photographer. You can put it right after or at the bottom

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Metagenomics_NM Would this image work, or would you prefer another image, for example one of the workflow slides showing FAIRyMAGs? Here is also the link to the full presentation, just in case: https://docs.google.com/presentation/d/10uxX1NXo4p7BW0V-twn9P7jVQ5bm_YV0/edit?usp=sharing&ouid=105538825359726077322&rtpof=true&sd=true

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Thanks @paulzierep!

@bebatut
bebatut merged commit 0cd1854 into galaxyproject:main Jul 24, 2026
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3 participants