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Pull requests: galaxyproject/tools-iuc

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Pull requests list

Update HAL, Paffy, Faffy to cactus 3.1.4 skip-version-check Allow IUC members to skip the version linter in PR reviews (use only for partially updated suites).
#7786 opened Mar 13, 2026 by Maed0x Loading…
3 of 5 tasks
9
Add Scop3P
#7784 opened Mar 12, 2026 by agdiaz Loading…
3 of 5 tasks
13
updated anndata to 0.11.4
#7782 opened Mar 11, 2026 by pavanvidem • Draft
3 of 5 tasks
DESeq2: add single count matrix input mode
#7779 opened Mar 11, 2026 by ksuderman • Draft
3 of 5 tasks
1
Add endorspy tool
#7778 opened Mar 10, 2026 by mertydn Loading…
Adjust Liftoff wrapper error detection
#7775 opened Mar 10, 2026 by d-callan • Draft
3 of 5 tasks
2
Update CEMiTool to 1.34.0 ready-for-review tool update/enhancement
#7773 opened Mar 10, 2026 by SaimMomin12 Loading…
3 of 5 tasks
Update ncbi_datasets macros.xml to clarify accepted list format
#7769 opened Mar 9, 2026 by jennaj Loading…
3 of 5 tasks
Updating tools/varvamp from version 1.3 to 1.3.1
#7763 opened Mar 9, 2026 by gxydevbot Loading…
Updating tools/cemitool from version 1.30.0 to 1.34.0
#7753 opened Mar 9, 2026 by gxydevbot Loading…
@SaimMomin12
Add ANGSD and contamination tools
#7739 opened Mar 3, 2026 by mertydn Loading…
Adding a new tool: Foldtree
#7738 opened Mar 3, 2026 by nromashchenko Loading…
3 of 5 tasks
Updating tools/pgxRpi from version 1.2.0 to 1.6.0
#7732 opened Mar 2, 2026 by gxydevbot Loading…
@SaimMomin12
1
Add mtnucratio tool
#7731 opened Mar 1, 2026 by mertydn Loading…
4 tasks done
15
Add Squidpy
#7730 opened Feb 28, 2026 by nilchia • Draft
3 of 5 tasks
fixes for ncbi_entrez_eutils
#7728 opened Feb 26, 2026 by bernt-matthias Loading…
3 of 5 tasks
8
WIP Picrust2 bump
#7727 opened Feb 26, 2026 by bernt-matthias • Draft
5 tasks
Add enzbert tool and data manager
#7724 opened Feb 24, 2026 by LeCorreP Loading…
3 of 5 tasks
8
Updates for pysradb
#7719 opened Feb 23, 2026 by bernt-matthias Loading…
3 of 5 tasks
Updating tools/meningotype from version 0.8.5 to 0.8.6b
#7714 opened Feb 23, 2026 by gxydevbot Loading…
Add CRAQ
#7712 opened Feb 22, 2026 by Smkingsize Loading…
3 of 5 tasks
2
Add MMseqs2 easy-* wrappers and refactor shared macros tool update/enhancement
#7711 opened Feb 22, 2026 by nekrut Loading…
3 of 5 tasks
15
[WIP] Bump dada2
#7706 opened Feb 19, 2026 by bernt-matthias Loading…
3 of 5 tasks
Update Obitools toolsuite to Obitools4
#7700 opened Feb 18, 2026 by kpayet26 Loading…
3 of 5 tasks
19
Simtext - Move credentials to reqs
#7699 opened Feb 17, 2026 by RZ9082 Loading…
2 of 5 tasks
@RZ9082
7
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