Releases: galaxyproject/training-material
Releases · galaxyproject/training-material
Release 2025 November 01
Monthly release of the GTN materials is now available on the archive.
📰 News
📅 Events
- Workshop on high-throughput sequencing data analysis with Galaxy (October 23, 2025)
- Galaxy Ecology training and collabroation fest (October 22, 2025)
- How can I analyse my texts, media, and data in the humanities and social sciences? (October 21, 2025)
- A practical workshop for (foodborne) pathogen detection from (direct Nanopore) sequencing data using Galaxy (October 13, 2025)
📚 Tutorials
- Audio data annotation with NEAL (Nature + Energy Audio labeler). (October 14, 2025)
- Creation of the labs in the different Galaxy instances for your community (October 04, 2025)
🧑🏫 Contributors
- @santinofaack (October 01, 2025)
- @annahenger (October 01, 2025)
- @abdullahkahraman (October 01, 2025)
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Release 2025 October 01
Monthly release of the GTN materials is now available on the archive.
📰 News
- We want you to help us organize the Galaxy Training Academy 2026 (September 12, 2025)
- GTN is now integrated with WorkflowHub (September 02, 2025)
📅 Events
- From data to discovery - Galaxy workshop at University of Graz (September 23, 2025)
- 2025 Galaxy Admin Training (Brno) (September 03, 2025)
- Introduction to Galaxy, the Open-Source Platform for FAIR Data Analysis (in German) (September 02, 2025)
🛤️ Learning pathways
📚 Tutorials
- OpenRefine Tutorial for researching cultural data (September 24, 2025)
- Creation of a Galaxy tutorial table for your community (September 17, 2025)
- Creation of resources listing Galaxy workflow for your community (September 17, 2025)
- Introduction to Digital Humanities in Galaxy (September 11, 2025)
❓ Faqs
- What is a Codex? (September 17, 2025)
- Creating a dataset collection with autobuild (September 16, 2025)
🛠️ Workflows
- Visualise amount of objects in Museum Collection (September 24, 2025)
- Argo-Glider Nitrate QCV (September 16, 2025)
- Introduction to DH in Galaxy (September 11, 2025)
🧑🏫 Contributors
- @uwwint (September 01, 2025)
- @sebastian-preissl (September 01, 2025)
- @martindemko (September 01, 2025)
🏢 Organisations
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2025-09-18
Merge pull request #6363 from galaxyproject/Deeptivarshney-patch-1 Fix broken links for installation steps
Release 2025 September 01
Monthly release of the GTN materials is now available on the archive.
📰 News
📚 Tutorials
- Indexing and profiling microbes with MetaSBT (August 25, 2025)
- Identifing Survival Markers of Brain tumor with Flexynesis (August 13, 2025)
- Modeling Breast Cancer Subtypes with Flexynesis (August 13, 2025)
- Quantification of electrophoresis gel bands using QuPath and Galaxy imaging tools (August 11, 2025)
- Unsupervised Analysis of Bone Marrow Cells with Flexynesis (August 10, 2025)
- Prepare Data from CbioPortal for Flexynesis Integration (August 10, 2025)
🛠️ Workflows
- Final - Survival Markers of Lower Grade (August 13, 2025)
- Final - Modeling Breast Cancer Subtypes + TABPFN (August 13, 2025)
- Electrophoresis-Gel-Bands-Image-Analysis (August 11, 2025)
- Hi-C Analysis with Galaxy Tutorial Workflow (August 11, 2025)
- Final - Unsupervised Analysis of Bone Marrow Cells (August 10, 2025)
- Flexynesis - get data from Cbioportal (August 10, 2025)
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Release 2025 August 01
Monthly release of the GTN materials is now available on the archive.
📰 News
- Scaling Up Hands-On Bioinformatics Training with TIAAS -- An Open University Perspective (July 03, 2025)
- Enhancing Scientific Training: The Galaxy Training Network's Role in the ELIXIR Training Life-Cycle (July 01, 2025)
📅 Events
🛤️ Learning pathways
📚 Tutorials
- MGnify v5.0 Amplicon Pipeline (July 30, 2025)
- Training Custom YOLO Models for Segmentation of Bioimages (July 25, 2025)
❓ Faqs
🛠️ Workflows
- MGnify amplicon summary tables (July 30, 2025)
- MGnify's amplicon pipeline v5.0 - rRNA prediction (July 30, 2025)
- MGnify's amplicon pipeline v5.0 - Quality control SE (July 30, 2025)
- MGnify's amplicon pipeline v5.0 - Quality control PE (July 30, 2025)
- MGnify's amplicon pipeline v5.0 - ITS (July 30, 2025)
- MGnify's amplicon pipeline v5.0 (July 30, 2025)
- MAPseq to ampvis2 (July 30, 2025)
- YOLO training and segmentation workflow (July 25, 2025)
🧑🏫 Contributors
💰 Grants
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Release 2025 July 01
Monthly release of the GTN materials is now available on the archive.
📰 News
📚 Tutorials
- Comparison of two annotation tools - Helixer and Braker3 (June 20, 2025)
- Phylodiversity analysis quick tutorial (June 06, 2025)
- Life Traits Ecoregionalization workflow (June 02, 2025)
- Taxonomic Analysis of eDNA (June 02, 2025)
❓ Faqs
🛠️ Workflows
- Comparison of two annotation tools: Helixer and Braker3 (June 20, 2025)
- Taxonomic Analysis of eDNA (June 02, 2025)
🧑🏫 Contributors
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Release 2024 December 01
Monthly release of the GTN materials is now available on the archive.
📅 Events
- 🖖🏾 SPOC II: the Write-a-Than (November 26, 2024)
- Galaxy at Congresso Brasileiro de Biologia Evolutiva (November 12, 2024)
📚 Tutorials
- Updating tool versions in a tutorial (November 29, 2024)
- Create a subdomain for your community on UseGalaxy.eu (November 27, 2024)
- Tracking of mitochondria and capturing mitoflashes (November 20, 2024)
- Running the GTN website online using GitHub CodeSpaces (November 11, 2024)
- Alternative Celery Deployment for Galaxy (November 07, 2024)
- Single Cell Publication - Data Analysis (November 07, 2024)
- Single Cell Publication - Data Plotting (November 07, 2024)
❓ Faqs
- Add Toolshed category to a tool (November 13, 2024)
- Supporting Tutorial Mode (GTN-in-Galaxy) in a tutorial (November 07, 2024)
🛠️ Workflows
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Release 2024 November 01
Monthly release of the GTN materials is now available on the archive.
Release 2024 October 01
Monthly release of the GTN materials is now available on the archive.
Release 2024 September 01
Monthly release of the GTN materials is now available on the archive.
📅 Events
📚 Tutorials
- Genome annotation with Helixer (August 21, 2024)
- Marine Omics identifying biosynthetic gene clusters (August 19, 2024)
- Working with Beacon V2: A Comprehensive Guide to Creating, Uploading, and Searching for Variants with Beacons (August 06, 2024)
- Querying a Beacon Database for Copy Number Variants (CNVs) (August 06, 2024)
- Calculating α and β diversity from microbiome taxonomic data (August 01, 2024)
🛠️ Workflows
- Training - Helixer (August 21, 2024)
- Marine Omics identifying biosynthetic gene clusters (August 19, 2024)
- WF5_Data_Interpretation_Worklow (August 08, 2024)
- WF4_Quantitation_Workflow (August 08, 2024)
- WF3_VERIFICATION_WORKFLOW (August 08, 2024)
- WF2_Discovery-Workflow (August 08, 2024)
- WF1_Database_Generation_Workflow (August 08, 2024)
- Calculating diversity from microbiome taxonomic data (August 06, 2024)
🧑🏫 Contributors
- @RZ9082 (August 01, 2024)
- @natalie-wa (August 01, 2024)
- @lybCNU (August 01, 2024)
- @hujambo-dunia (August 01, 2024)
- @dianichj (August 01, 2024)
- @ahmedhamidawan (August 01, 2024)