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Pull requests: galaxyproteomics/tools-galaxyp

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Pull requests list

Bump PeptideShaker wrappers for InstaNovo support
#828 opened Jun 23, 2026 by BioGeek • Draft
peptideshaker bump wip
#821 opened May 4, 2026 by bernt-matthias Collaborator Loading…
Update siriusAdapter credentials
#820 opened Apr 27, 2026 by PaulineSGN • Draft
4
WiP: Cardinal 3.6 update
#796 opened Apr 29, 2025 by MarenStillger Contributor Loading…
remove duplicated rdata file
#791 opened Apr 8, 2025 by martenson Contributor Loading…
1
OpenMS 3.2
#783 opened Nov 24, 2024 by bernt-matthias Collaborator • Draft
1
add bio.tools id to xml
#779 opened Nov 6, 2024 by georgehe23 Loading…
1
change reviewed to true/false
#778 opened Oct 27, 2024 by bgruening Member Loading…
Initial commit for i2nca
#777 opened Oct 14, 2024 by cKNUSPeR • Draft
10
Add TMTpro Options for PeptideShaker Tools
#776 opened Sep 24, 2024 by reid-wagner Contributor Loading…
2
Add bio.tools for peptideshaker
#749 opened Mar 11, 2024 by bebatut Contributor Loading…
2
ProteoRE tool 'reactome' Re-opened wip
#738 opened Jan 31, 2024 by reid-wagner Contributor • Draft
2
initial commit of pepnet
#726 opened Aug 30, 2023 by bernt-matthias Collaborator • Draft
bump msconvert
#721 opened Jul 13, 2023 by bernt-matthias Collaborator • Draft
19
Updated output label in ThermoRawFileParser
#714 opened May 5, 2023 by zargham-ahmad Loading…
1
1
Update requirements in proteogenomics macros
#677 opened Jul 28, 2022 by chambm Contributor Loading…
1
Added hitmap wrapper
#636 opened Sep 27, 2021 by GraceAHall Loading…
20
move eggnog datamanager wip
#618 opened Jul 14, 2021 by bernt-matthias Collaborator Loading…
2 tasks
uniprot downloader: streaming requests etc
#615 opened Jul 6, 2021 by bernt-matthias Collaborator Loading…
2 tasks
Fix MS level filter
#605 opened Jun 15, 2021 by chambm Contributor Loading…
1
[WIP] ProteoRE prot_features_Uniprot_3species wip
#603 opened Jun 3, 2021 by combesf Collaborator Loading…
@vloux @yvandenb @combesf
15
[WIP] ProteoRE ID_converter tool wip
#602 opened Jun 1, 2021 by combesf Collaborator Loading…
@vloux @yvandenb @combesf
8
[WIP] ProteoRE topGO enrichment analysis 20210412 wip
#598 opened May 17, 2021 by combesf Collaborator Loading…
@vloux @yvandenb @combesf
24
ProteoRE kegg_pathways_coverage tool wip
#597 opened May 17, 2021 by combesf Collaborator Loading…
@vloux @yvandenb @combesf
ProteoRE tool 'reactome' wip
#593 opened May 11, 2021 by combesf Collaborator Loading…
@vloux @yvandenb @combesf
7
ProTip! What’s not been updated in a month: updated:<2026-06-27.