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Merge updates from GEOS-Chem 14.5.3 back into dev/14.6.0#2758

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yantosca merged 4 commits intodev/14.6.0from
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Mar 11, 2025
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Merge updates from GEOS-Chem 14.5.3 back into dev/14.6.0#2758
yantosca merged 4 commits intodev/14.6.0from
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@yantosca yantosca commented Mar 5, 2025

Name and Institution (Required)

Name: Bob Yantosca
Institution: Harvard + GCST

Describe the update

This PR seeks to bring the updates introduced in GEOS-Chem 14.5.3 back into the GEOS-Chem 14.6.0 development stream.

Expected changes

This is a zero-diff update.

Related Github Issue

lizziel and others added 4 commits February 6, 2025 11:22
This avoids differences introduced when breaking up a CESM run in time.

Signed-off-by: Lizzie Lundgren <elundgren@seas.harvard.edu>
This merge brings PR #2713 (Read AEIC2019 emissions every timestep
in CESM, by @lizziel) into the GEOS-Chem "no-diff-to-benchmark"
development stream.

This PR updates the HEMCO configuration file used with CESM to read
AEIC emissions every model timestep. This avoids introducing small
differences when the model runs are broken up in time.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>
This merge brings updates from the "no-diff-to-benchmark" development
stream into the release/14.5.3 branch, in anticipation of the
GEOS-Chem (science codebase) 14.5.3 release.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>
Updated version numbers in:
- CHANGELOG.md

Please see CHANGELOG.md for updates added to this version.

Signed-off-by: Bob Yantosca <yantosca@seas.harvard.edu>
@yantosca yantosca added category: Feature Request New feature or request no-diff-to-benchmark This update will not change the results of fullchem benchmark simulations labels Mar 5, 2025
@yantosca yantosca requested a review from msulprizio March 5, 2025 19:40
@yantosca yantosca self-assigned this Mar 5, 2025
@yantosca yantosca merged commit e5cab82 into dev/14.6.0 Mar 11, 2025
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All GEOS-Chem Classic integration tests passed:

==============================================================================
GEOS-Chem Classic: Execution Test Results

CodeDir   : bda10bf geos-chem-shared-docs update: Add info about AWS anonymous login
GEOS-Chem : e5cab82af Merge updates from version 14.5.3 into dev/14.6.0
HEMCO     : 95694c0 geos-chem-shared-docs update: Update to commit c769e00
Cloud-J   : f8a2b7f Update version number for 8.0.1 release
HETP      : 2a99b24 Merge pull request #2 from geoschem/bugfix/initialize_local_variables

Using 24 OpenMP threads
Number of execution tests: 30

Submitted as SLURM job: 6285966
==============================================================================

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%  All execution tests passed!  %%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

All tests were zero-diff w/r/t 14.6.0-alpha.10 except for

  • TOMAS (parallel error?)
  • APM (parallel error?)
  • fullchem_alldiags (KppDiags and ObsPack differ

All GCHP integration tests passed except for TransportTracers, which failed with an ExtData error:

0007: CAP.EXTDATA: ERROR: UpdateBracketTime: Could not find data within maximum offset range from ./HcoDir/CEDS/v2023-04/%y4/CEDS_CO_0.1x0.1_%y4.nc
0007: CAP.EXTDATA: ERROR:             ==> Test year: 11985 and reference year: 1985
0007: CAP.EXTDATA: ERROR:             ==> Reference time: 1985-01-01 00:00:00
0007: CAP.EXTDATA: ERROR:             ==> Last check    : 11986-01-01 00:00:00

We are currently investigating.

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After applying PR #2765, all GCHP integration tests now pass:

==============================================================================
GCHP: Execution Test Results

CodeDir       : cea21c0 Merge updates from GCHP 14.5.3 into dev/14.6.0
MAPL          : 6207fd0 Merge pull request #38 from geoschem/bugfix/intel_build_error_in_AbstractComponent
GMAO_Shared   : 4ddb3ec Merge pull request #2 from geoschem/feature/mapl-upgrade
ESMA_cmake    : ad5deba Added ecbuild as a submodule of ESMA_cmake
gFTL-shared   : 4b82492 Merge branch 'upstream_v1.5.0' into feature/v1.5.0
FMS           : 259759d Merge pull request #3 from geoschem/feature/update_gmao_libs
FVdycoreCubed : af42462 Merge PR #8 (Add PLEadv diagnostic for offline advection in GCHP)
geos-chem     : cb9ae8c70 Merge PR #2765 (Bug fix: Update paths to CEDS_CO_25 emissions)
HEMCO         : 95694c0 geos-chem-shared-docs update: Update to commit c769e00
yaFyaml       : 19afe50 Merge branch 'upstream_v1.0.4' into feature/v1.0.4
pFlogger      : 2c4b724 Merge branch 'upstream_v1.9.1' into feature/v1.9.1
Cloud-J       : f8a2b7f Update version number for 8.0.1 release
HETP          : 2a99b24 Merge pull request #2 from geoschem/bugfix/initialize_local_variables

Number of execution tests: 12

Submitted as SLURM job: 6300913
==============================================================================

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%  All execution tests passed!  %%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

Also all tests were identical to 14.6.0-alpha.10 except for TransportTracers (which now reads 0.1 x 0.1 CEDS CO emissions).

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category: Feature Request New feature or request no-diff-to-benchmark This update will not change the results of fullchem benchmark simulations

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3 participants