ViMMS 2.1.1
Minor speed improvement, about 10-20% faster from:
- Defaults to using fast chem set in the mass spec, which is slightly faster.
- Minor speed-up by removing unused attributes in Roi Builder
- Add an option not to generate the actual MS2 spectra. Useful when we care only which chemicals are fragmented, not how the generated MS2 spectra look like.
Tested with Python 3.10 and seems to work fine. Also incorporates the final analysis codes from DDAvsDIA comparison.