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Automated Code Change CI #161: Commit d5c9fff pushed by tomwardio
3m 44s main
main
3m 44s
Remove obsolete : ... from all python functions parameters annotati… CI #160: Commit 34d166b pushed by tomwardio
3m 22s main
main
3m 22s
ci: add Ruff config, pre-commit hooks, and GitHub Actions lint workflow CI #157: Pull request #43 synchronize by korbonits
37s korbonits:ci/ruff-precommit-and-actions
korbonits:ci/ruff-precommit-and-actions
37s
Correct docstring for a few functions in the alphagenome data module. CI #153: Commit 4dd4522 pushed by tomwardio
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Add a Colab notebook to demonstrate how to score splicing variants ag… CI #152: Commit 6973cfe pushed by tomwardio
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3m 36s
Improve transcript strand arrow plotting. CI #151: Commit b3e31f0 pushed by tomwardio
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3m 30s
Update version to v.0.6.1 CI #150: Commit c9311d7 pushed by tomwardio
3m 22s v0.6.1
v0.6.1
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Update version to v.0.6.1 CI #149: Commit c9311d7 pushed by tomwardio
3m 35s main
main
3m 35s
Fix IndexError when plotting annotations without labels. CI #148: Commit 2a5318c pushed by tomwardio
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Return early if there are no junctions to threshold. CI #147: Commit 442d5a9 pushed by tomwardio
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Fix example analysis typos. CI #144: Commit 10aa964 pushed by tomwardio
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Fix tidy_anndata to return empty dataframe when there are no scores. CI #143: Commit e72cde7 pushed by tomwardio
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Speed-up seqlogo plotting by ~100x using PathCollection. CI #142: Commit e6901f1 pushed by tomwardio
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Update version to 0.6.0 CI #141: Commit 792b10c pushed by tomwardio
3m 15s v0.6.0
v0.6.0
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Update version to 0.6.0 CI #140: Commit 792b10c pushed by tomwardio
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3m 23s
Add pages to alphagenome bibtex CI #139: Commit 525e964 pushed by tomwardio
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Update README and CONTRIBUTING with more guidelines on pull requests. CI #138: Commit 807412a pushed by tomwardio
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Add .gitignore file. CI #137: Commit ff798f2 pushed by tomwardio
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Add properties for whether a variant is an indel, frameshift or SV. CI #136: Commit bbb465e pushed by copybara-service Bot
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Add option to set y axis bounds. CI #135: Commit 002832c pushed by tomwardio
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3m 26s
Copybara import of the project: CI #129: Commit 327ea82 pushed by tomwardio
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3m 37s
Upgrade GitHub Actions for Node 24 compatibility CI #128: Pull request #33 opened by salmanmkc
3m 31s salmanmkc:upgrade-github-actions-node24
salmanmkc:upgrade-github-actions-node24
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Add support for processing splice sites from GTF. CI #127: Commit ba3c371 pushed by tomwardio
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4m 14s
Add support for None width in gene interval scorer. CI #126: Commit 9b0aa65 pushed by tomwardio
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Add missing interval_variant argument from DnaModel ABC. CI #124: Commit 38918e3 pushed by tomwardio
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2m 5s