Skip to content

HADDOCK24 protein glycan tutorial #703

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 13 commits into from
May 20, 2025
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Binary file not shown.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
550 changes: 550 additions & 0 deletions education/HADDOCK24/HADDOCK24-protein-glycan/index.md

Large diffs are not rendered by default.

Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
2 changes: 1 addition & 1 deletion education/HADDOCK3/HADDOCK3-protein-glycan/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -210,7 +210,7 @@ align 1UU6_l_u, 1UU6
## Defining restraints for docking


### Visualing the information about the bindind site
### Visualising the information about the binding site

Here we mimic a scenario where we have information about the glycan binding site on the protein, but no knowledge about which monosaccharide units are relevant for the binding. In this case (see Fig. 1), all the four beta-D-glucopyranose units are at the interface, although this might not be true in general, especially when longer glycans are considered.

Expand Down