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TypicalMicrobiomeSignatures

run Typicalsig to generate 4 typical healthy signature and prevelance csv files:

  1. matrix_genus_adult.csv
  2. matrix_species_adult.csv
  3. matrix_genus_child.csv
  4. matrix_species_child.csv files are uploaded to Zenodo: https://doi.org/10.5281/zenodo.6342450

run BugSigDBStats.rmd to repriduce analysis for typical signature manuscript

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Typical microbiome signatures identification and applications in epidemiological analysis

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