Documentation

.devcontainer/devcontainer.json

@@ -1,19 +1,19 @@
-{
-	"name": "My Container",
-	"build": {
-		"context": "..",
-		"dockerfile": "../Dockerfile"
-	},
-	"runArgs": [
-		"--gpus", "all"
-	],
-	"forwardPorts": [8888],
-    "customizations": {
-        "vscode": {
-            "extensions": [
-                "ms-python.python",
-                "ms-toolsai.jupyter"
-            ]
-        }
-    }
+{
+	"name": "My Container",
+	"build": {
+		"context": "..",
+		"dockerfile": "../Dockerfile"
+	},
+	"runArgs": [
+		"--gpus", "all"
+	],
+	"forwardPorts": [8888],
+    "customizations": {
+        "vscode": {
+            "extensions": [
+                "ms-python.python",
+                "ms-toolsai.jupyter"
+            ]
+        }
+    }
 }

.gitignore

@@ -1,27 +1,49 @@
-# notebooks and generated files
-test_import.ipynb
-
-# byte-compiled
-__pycache__/
-
-# environments
-.venv
-venv/
-
-# unit test / coverage reports
-htmlcov/
-.tox/
-.nox/
-.coverage
-.coverage.*
-.cache
-nosetests.xml
-coverage.xml
-*.cover
-*.py,cover
-.hypothesis/
-.pytest_cache/
-.pylintrc
-
-# vscode
+# notebooks and generated files
+test_import.ipynb
+
+# byte-compiled
+__pycache__/
+*.py[cod]
+*$py.class
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+pip-wheel-metadata/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# environments
+.venv
+venv/
+
+# unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+.pylintrc
+
+# vscode
 .vscode/*.*

Dockerfile

@@ -1,44 +1,44 @@
-FROM nvidia/cuda:12.2.2-devel-ubuntu22.04
-
-# Set working directory
-WORKDIR /workspace
-
-# Set non-interactive installation mode and configure timezone
-ENV DEBIAN_FRONTEND=noninteractive
-ENV TZ=UTC
-
-# Environment variables for Llama library
-ENV LLAMA_CUBLAS=1
-ENV CMAKE_ARGS=-DLLAMA_CUBLAS=on
-ENV FORCE_CMAKE=1
-
-# Install Python, build tools, compilers, and git
-RUN apt-get update && apt-get install -y \
-    python3-pip \
-    python3-dev \
-    build-essential \
-    cmake \
-    libblas-dev \
-    liblapack-dev \
-    gfortran \
-    git \
-    && rm -rf /var/lib/apt/lists/*
-
-# Update pip and install wheel
-RUN python3 -m pip install --upgrade pip wheel
-
-# Install Requirements
-COPY requirements.txt .
-RUN python3 -m pip install -r requirements.txt
-
-# Special installation for llama-cpp-python with GPU support
-RUN pip install llama-cpp-python==0.2.55 --no-cache-dir --force-reinstall --verbose
-
-# Force specific numpy version
-RUN python3 -m pip install numpy==1.26.2 --no-cache-dir --force-reinstall
-
-# Expose Jupyter port
-EXPOSE 8888
-
-# Start Jupyter Notebook
+FROM nvidia/cuda:12.2.2-devel-ubuntu22.04
+
+# Set working directory
+WORKDIR /workspace
+
+# Set non-interactive installation mode and configure timezone
+ENV DEBIAN_FRONTEND=noninteractive
+ENV TZ=UTC
+
+# Environment variables for Llama library
+ENV LLAMA_CUBLAS=1
+ENV CMAKE_ARGS=-DLLAMA_CUBLAS=on
+ENV FORCE_CMAKE=1
+
+# Install Python, build tools, compilers, and git
+RUN apt-get update && apt-get install -y \
+    python3-pip \
+    python3-dev \
+    build-essential \
+    cmake \
+    libblas-dev \
+    liblapack-dev \
+    gfortran \
+    git \
+    && rm -rf /var/lib/apt/lists/*
+
+# Update pip and install wheel
+RUN python3 -m pip install --upgrade pip wheel
+
+# Install Requirements
+COPY requirements.txt .
+RUN python3 -m pip install -r requirements.txt
+
+# Special installation for llama-cpp-python with GPU support
+RUN pip install llama-cpp-python==0.2.55 --no-cache-dir --force-reinstall --verbose
+
+# Force specific numpy version
+RUN python3 -m pip install numpy==1.26.2 --no-cache-dir --force-reinstall
+
+# Expose Jupyter port
+EXPOSE 8888
+
+# Start Jupyter Notebook
 CMD ["jupyter", "notebook", "--ip=0.0.0.0", "--no-browser", "--allow-root"]

LICENSE

@@ -1,21 +1,21 @@
-MIT License
-
-Copyright (c) 2024 hc-sc-ocdo-bdpd
-
-Permission is hereby granted, free of charge, to any person obtaining a copy
-of this software and associated documentation files (the "Software"), to deal
-in the Software without restriction, including without limitation the rights
-to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-copies of the Software, and to permit persons to whom the Software is
-furnished to do so, subject to the following conditions:
-
-The above copyright notice and this permission notice shall be included in all
-copies or substantial portions of the Software.
-
-THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
-SOFTWARE.
+MIT License
+
+Copyright (c) 2024 hc-sc-ocdo-bdpd
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.