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Discrepancy in Codon Frequency Files Between HIV-1 NGS Pipelines

Status: Open.

#13 In hivdb/codfreq;

· Hosseinem opened on Mar 3, 2025

Codfreq dag or Flowchart?

Status: Open.

#12 In hivdb/codfreq;

· CEJ-R opened on Dec 5, 2024

samtools sort: failed to read header from "-"

Status: Open.

#11 In hivdb/codfreq;

· LilyAnderssonLee opened on Nov 29, 2024

CodFreq allow entry point from .sam file

Status: Open.

#10 In hivdb/codfreq;

· TKMarkCheng opened on Oct 25, 2024

cProfile in codfreq-runner

Status: Open.

#9 In hivdb/codfreq;

· MarcNiebel opened on Feb 19, 2024

Timeout option to end ECS CodFreq runner when task is lasted more than 24 hours

Status: Open.

#7 In hivdb/codfreq;

· philiptzou opened on Jun 11, 2023

Differences in CodFreq file outputs

Status: Open.

#6 In hivdb/codfreq;

· MarcNiebel opened on May 23, 2023