Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Cistrome Data Browser Toolkit
Install dependencies with yarn (v1):
yarnRun development server for demo app:
yarn startRun tests:
yarn test
# or
yarn test --watchBuild demo app for production:
yarn buildBuild for NPM package:
yarn build-pkgyarn docs- Notebooks for short analyses or file conversions: ./notebooks/
- Pipeline for combining CistromeDB bigWig files into HiGlass multivec (HDF5-based) files: ./pipelines/cistrome-to-multivec/
- HiGlass
- HiGlass Server and our fork Cistrome Explorer HiGlass Server
- To deploy
cistrome-explorer-higlass-serverto AWS ECS please refer to the modifieddocker-context/directory and associated README here.
- To deploy
- clodius
- pybbi