Skip to content
@hubmapconsortium

HuBMAP Consortium

This is the GitHub organization for repos related to the work of the HuBMAP Consortium.

Pinned Loading

  1. entity-api entity-api Public

    A set of web service calls to return information about HuBMAP entities

    Python 3 1

  2. gateway gateway Public

    Custom gateway service with auth check for APIs and file assets not hosted with AWS API Gateway

    Python

  3. search-api search-api Public

    HuBMAP search service and associated pieces to create an index

    Python 2 2

  4. portal-ui portal-ui Public

    HuBMAP Data Portal front end

    TypeScript 13 2

  5. ingest-ui ingest-ui Public

    HuBMAP Data Ingest Portal

    JavaScript 4

  6. ingest-pipeline ingest-pipeline Public

    Data ingest pipeline(s) for QA/metadata etl/post-processing

    Python 4 6

Repositories

Showing 10 of 181 repositories
  • hra-ui Public

    HRA UIs Monorepo (includes HRA Portal, EUI, RUI, ASCT+B Reporter, and more)

    hubmapconsortium/hra-ui’s past year of commit activity
    TypeScript 4 MIT 3 94 11 Updated May 11, 2025
  • hra-kg Public

    HRA-KG: Human Reference Atlas Knowledge Graph

    hubmapconsortium/hra-kg’s past year of commit activity
    Mermaid 4 MIT 1 8 3 Updated May 10, 2025
  • search-python-sdk Public

    Python SDK to access HuBMAP Search API

    hubmapconsortium/search-python-sdk’s past year of commit activity
    Python 0 MIT 0 1 1 Updated May 10, 2025
  • entity-python-sdk Public

    Python SDK to access HuBMAP Entity API

    hubmapconsortium/entity-python-sdk’s past year of commit activity
    Python 0 MIT 0 1 1 Updated May 10, 2025
  • hra-registrations Public

    Manually curated HRA Dataset Graphs

    hubmapconsortium/hra-registrations’s past year of commit activity
    HTML 1 MIT 0 14 0 Updated May 9, 2025
  • portal-containers Public

    Docker containers to pre-process data for visualization in the portal

    hubmapconsortium/portal-containers’s past year of commit activity
    Python 0 MIT 1 22 (1 issue needs help) 27 Updated May 9, 2025
  • user_workspaces_server Public
    hubmapconsortium/user_workspaces_server’s past year of commit activity
    Python 0 MIT 1 6 0 Updated May 9, 2025
  • portal-ui Public

    HuBMAP Data Portal front end

    hubmapconsortium/portal-ui’s past year of commit activity
    TypeScript 13 MIT 2 200 32 Updated May 9, 2025
  • antibody-api Public

    API for the Antibody DB.

    hubmapconsortium/antibody-api’s past year of commit activity
    Python 0 0 32 1 Updated May 9, 2025
  • ingest-api Public

    HuBMAP Data Ingest API

    hubmapconsortium/ingest-api’s past year of commit activity
    Python 0 MIT 0 19 1 Updated May 9, 2025
View all repositories

Top languages

Loading…

Most used topics

Loading…