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1. bwa bwa Public

   Forked from lh3/bwa

   Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

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2. dna-seq-varlociraptor dna-seq-varlociraptor Public

   Forked from snakemake-workflows/dna-seq-varlociraptor

   A Snakemake workflow for calling small and structural variants under any kind of scenario (tumor/normal, tumor/normal/relapse, germline, pedigree, populations) via the unified statistical model of …

   Python

3. bioconda-recipes bioconda-recipes Public

   Forked from bioconda/bioconda-recipes

   Conda recipes for the bioconda channel.

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4. uncovar uncovar Public

   Forked from IKIM-Essen/uncovar

   Transparent and robust SARS-CoV-2 variant calling and lineage assignment with comprehensive reporting.

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5. rust-bio rust-bio Public

   Forked from rust-bio/rust-bio

   This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

   Rust