Skip to content

Add try/except to avoid OSError when file is missing wanted variable group #578

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
jrenrut wants to merge 1 commit into
base: development
Choose a base branch
from
Open

Add try/except to avoid OSError when file is missing wanted variable group #578

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
15 changes: 12 additions & 3 deletions icepyx/core/read.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -628,9 +628,18 @@ def load(self):
s3 = earthaccess.get_s3fs_session(daac="NSIDC")
file = s3.open(file, "rb")

all_dss.append(
self._build_single_file_dataset(file, groups_list)
) # wanted_groups, vgrp.keys()))
try:
all_dss.append(
self._build_single_file_dataset(file, groups_list)
) # wanted_groups, vgrp.keys()))
except OSError as oe:
warnings.warn(
f"{file} is excluded from this dataset because it"
"did not contain all wanted variable groups,"
f"causing the following error: {oe}",
stacklevel=2,
)
continue

# Closing the file prevents further operations on the dataset
# from s3fs.core import S3File
Expand Down