release v2.0.2

.github/ISSUE_TEMPLATE/bug_report.yml

@@ -0,0 +1,92 @@
+name: Bug Report
+description: Create a report about an error to help us improve
+
+type: bug
+body:
+  - type: markdown
+    attributes:
+      value: >
+        Thanks for taking the time to contribute to icepyx by filling out this bug report! We appreciate
+        your help in improving icepyx and making data more accessible.
+
+  - type: textarea
+    id: what-happened
+    attributes:
+      label: Describe the bug
+      description: |
+        A clear and concise description of what the problem is. In 1-3 sentences, summarize what you were
+        trying to accomplish and what happened instead.
+      placeholder: |
+        Example: While attempting to download 2 granules using `region.download_granules()` I got an error
+        informing me that I needed to login, but I had already provided my login information.
+
+        Example: While searching for data using `ipx.Query()` using the `spatial_extent` filter but upon
+        opening my files I see that some of the granules are located outside the specified spatial extent.
+    validations:
+      required: true
+
+  - type: textarea
+    id: expected
+    attributes:
+      label: Expected behavior
+      description: |
+        A clear and concise description of what you expected to happen.
+      placeholder: |
+        I expected 12 granules. The granules ids I expected were ...
+
+  - type: textarea
+    id: sample-code
+    attributes:
+      label: Reproducible Example
+      description: >
+        Minimal, contained code snippet that describes the problem (also known as an MRE, or Minimal Reproducible Example).
+        See more about creating MREs [here](https://matthewrocklin.com/minimal-bug-reports/#do_3). If you're not sure how to
+        create an MRE just paste your best version of an MRE and we will discuss your example in the issue comments. Be
+        sure to include granule ids if your issue pertains to a specific granule.
+
+        This will be automatically formatted into code, so no need for markdown backticks.
+      render: Python
+      value: |
+        import icepyx as ipx
+
+        # your minimal reproducible code ...
+
+  - type: input
+    id: version
+    attributes:
+      label: Version
+      description: |
+        What version of icepyx are you using?
+
+        If you're not sure what version of icepyx you're using, run `ipx.__version__` from a Python file
+        after importing icepyx
+      placeholder: v2.0.1
+
+  - type: input
+    id: sys-info
+    attributes:
+      label: System Information
+      description: What type of operating system are you using?
+      placeholder: Ex. Apple, Dell, Cryocloud, ...
+
+  - type: textarea
+    id: logs
+    attributes:
+      label: Relevant log output
+      description: Please copy and paste any relevant log output. This will be automatically formatted into code, so no need for backticks.
+      render: shell
+
+  - type: textarea
+    id: screenshots
+    attributes:
+      label: screenshots
+      description: If applicable, add screenshots to help explain your problem.
+
+  - type: checkboxes
+    id: terms
+    attributes:
+      label: Code of Conduct
+      description: By submitting this issue, you agree to follow our [Code of Conduct](https://icepyx.readthedocs.io/en/latest/contributing/code_of_conduct_link.html).
+      options:
+        - label: I agree to follow this project's Code of Conduct
+          required: true

.github/ISSUE_TEMPLATE/feature_request.yml

@@ -0,0 +1,49 @@
+name: Feature request
+description: Suggest an idea for a new icepyx feature
+
+type: bug
+body:
+  - type: markdown
+    attributes:
+      value: >
+        Thanks for taking the time to contribute to icepyx by requesting a feature! We appreciate
+        your help in improving icepyx and making data more accessible.
+
+  - type: textarea
+    id: feature-description
+    attributes:
+      label: Is your feature request related to a problem? Please describe.
+      description: |
+        A clear and concise description of what the problem is. Ex. I'm always frustrated when [...]
+    validations:
+      required: true
+
+  - type: textarea
+    id: solution
+    attributes:
+      label: Describe the solution you'd like
+      description: |
+        A clear and concise description of what you want to happen.
+
+  - type: textarea
+    id: alternatives
+    attributes:
+      label: Describe alternatives you've considered
+      description: |
+        A clear and concise description of any alternative solutions or features you've considered.
+
+  - type: textarea
+    id: context
+    attributes:
+      label: Additional context
+      description: |
+        Add any other context or screenshots about the feature request here.
+
+  - type: checkboxes
+    id: terms
+    attributes:
+      label: Code of Conduct
+      description: By submitting this issue, you agree to follow our [Code of Conduct](https://icepyx.readthedocs.io/en/latest/contributing/code_of_conduct_link.html).
+      options:
+        - label: I agree to follow this project's Code of Conduct
+          required: true

.github/workflows/get_pypi_stats.yml

@@ -16,7 +16,7 @@ jobs:
     # Steps represent a sequence of tasks that will be executed as part of the job
     steps:
     # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-    - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
+    - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
       with:
         ref: "traffic"
 

.github/workflows/integration_test.yml

@@ -47,12 +47,12 @@ jobs:
           exit 1
 
       - name: "Checkout source"
-        uses: "actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8" # v5.0.0
+        uses: "actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd" # v6.0.2
         with:
           fetch-depth: 0
 
       - name: Set up Python
-        uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
+        uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
         with:
           python-version: "3.12"
 
@@ -72,6 +72,6 @@ jobs:
         # pytest icepyx/tests/integration --verbose --cov app -m "[not] downloads_data"
 
       - name: "Upload coverage report"
-        uses: "codecov/codecov-action@5a1091511ad55cbe89839c7260b706298ca349f7" # v5.5.1
+        uses: "codecov/codecov-action@671740ac38dd9b0130fbe1cec585b89eea48d3de" # v5.5.2
         with:
           token: "${{ secrets.CODECOV_TOKEN }}"

.github/workflows/linter_actions.yml

@@ -9,9 +9,9 @@ jobs:
   lint:
     runs-on: ubuntu-latest
     steps:
-      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
+      - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
 
       # Use the Ruff linter to annotate code style / best-practice issues
       # NOTE: More config provided in pyproject.toml
       - name: Lint and annotate PR
-        uses: astral-sh/ruff-action@57714a7c8a2e59f32539362ba31877a1957dded1 # v3.5.1
+        uses: astral-sh/ruff-action@4919ec5cf1f49eff0871dbcea0da843445b837e6 # v3.6.1

.github/workflows/publish_to_pypi.yml

@@ -21,14 +21,14 @@ jobs:
 
     steps:
     - name: Checkout
-      uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
+      uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
       with:
         # fetch all history so that setuptools-scm works
         fetch-depth: 0
         persist-credentials: false
 
     - name: Set up Python
-      uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
+      uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
       with:
         python-version: '3.11'
 
@@ -52,7 +52,7 @@ jobs:
         ls -lh dist/
 
     - name: Store the distribution packages
-      uses: actions/upload-artifact@330a01c490aca151604b8cf639adc76d48f6c5d4 # v5.0.0
+      uses: actions/upload-artifact@b7c566a772e6b6bfb58ed0dc250532a479d7789f # v6.0.0
       with:
         name: python-package-distributions
         path: dist/
@@ -72,7 +72,7 @@ jobs:
 
     steps:
     - name: Download all the dists
-      uses: actions/download-artifact@018cc2cf5baa6db3ef3c5f8a56943fffe632ef53 # v6.0.0
+      uses: actions/download-artifact@37930b1c2abaa49bbe596cd826c3c89aef350131 # v7.0.0
       with:
         name: python-package-distributions
         path: dist/
@@ -96,7 +96,7 @@ jobs:
 
     steps:
     - name: Download all the dists
-      uses: actions/download-artifact@018cc2cf5baa6db3ef3c5f8a56943fffe632ef53 # v6.0.0
+      uses: actions/download-artifact@37930b1c2abaa49bbe596cd826c3c89aef350131 # v7.0.0
       with:
         name: python-package-distributions
         path: dist/

.github/workflows/traffic_action.yml

@@ -17,7 +17,7 @@ jobs:
     # Steps represent a sequence of tasks that will be executed as part of the job
     steps:
     # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-    - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
+    - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
       with:
         ref: "traffic"
 

.github/workflows/typecheck.yml

@@ -13,11 +13,11 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
+      - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
         with:
           fetch-depth: 0
 
-      - uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
+      - uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
         with:
           python-version: "3.11"
 

.github/workflows/uml_action.yml

@@ -12,7 +12,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: Check out repository
-        uses: actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8 # v5.0.0
+        uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
         with:
           ref: ${{ github.event.pull_request.head.ref }}
       - name: set up environment

.github/workflows/unit_test.yml

@@ -30,12 +30,12 @@ jobs:
       matrix:
         python-version: ["3.11", "3.13"] #NOTE: min and max Python versions supported by icepyx
     steps:
-      - uses: "actions/checkout@08c6903cd8c0fde910a37f88322edcfb5dd907a8" # v5.0.0
+      - uses: "actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd" # v6.0.2
         with:
           fetch-depth: 0
 
       - name: Set up Python
-        uses: actions/setup-python@e797f83bcb11b83ae66e0230d6156d7c80228e7c # v6.0.0
+        uses: actions/setup-python@a309ff8b426b58ec0e2a45f0f869d46889d02405 # v6.2.0
         with:
           python-version: "${{ matrix.python-version }}"
 
@@ -46,9 +46,9 @@ jobs:
 
       - name: "Run tests"
         run: |
-          pytest icepyx/tests/unit --verbose --cov app
+          pytest icepyx/tests/unit --verbose --doctest-modules icepyx/core --cov app
 
       - name: "Upload coverage report"
-        uses: "codecov/codecov-action@5a1091511ad55cbe89839c7260b706298ca349f7" # v5.5.1
+        uses: "codecov/codecov-action@671740ac38dd9b0130fbe1cec585b89eea48d3de" # v5.5.2
         with:
           token: "${{ secrets.CODECOV_TOKEN }}"

.pre-commit-config.yaml

@@ -26,14 +26,14 @@ repos:
           - tomli
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.14.3
+    rev: v0.15.4
     hooks:
       - id: ruff
         args: ["--fix", "--show-fixes"]
       - id: ruff-format
 
   - repo: https://github.com/abravalheri/validate-pyproject
-    rev: v0.24.1
+    rev: v0.25
     hooks:
       - id: validate-pyproject
 

doc/source/tracking/citations.rst

@@ -26,15 +26,19 @@ Peer-reviewed publications about icepyx software
 .. bibliography:: icepyx_pubs.bib
     :style: mystyle
 
-    joss2023
     quest2025
+    joss2023
+
 
 icepyx in the open-source landscape
 
 .. bibliography:: icepyx_pubs.bib
     :style: mystyle
 
+    chudley2024
+    tankersley2024
     Bednar2023
+    Shean2023
 
 Presentations and Materials Featuring icepyx
 --------------------------------------------
@@ -43,8 +47,10 @@ Presentations that feature or explain icepyx
 .. bibliography:: icepyx_pubs.bib
     :style: mystyle
 
+    2024_IS2HW
     quest2023agu
     selper2023
+    2023_IS2HW
     js2022agu
     2022_IS2-HW-tutorials
     js2021agu
@@ -59,11 +65,19 @@ Research that utilizes icepyx for ICESat-2 data
 .. bibliography:: icepyx_pubs.bib
     :style: mystyle
 
+    al-attabi2026
+    narin2026
+    fair2025
+    leite2025
+    tian2025
+    eidam2024
+    golin2024
+    kamath2024
+    malambo2024
     Tian2024
     Freer2023
     Idestrom2023
     Mallinis2023
-    Shean2023
     Snellink2023
     Eidam2022
     Leeuwen:2022