ICGC ARGO RNA-Seq alignment

This repositories collects the tool packages used for RNA-Seq alignments in context of the ICGC ARGO project.

Currently available tools:

Name		Name	Last commit message	Last commit date
Latest commit History 140 Commits
.github/workflows		.github/workflows
genome-alignment-hisat2		genome-alignment-hisat2
genome-alignment-star		genome-alignment-star
modules/raw.githubusercontent.com/icgc-argo-workflows/dna-seq-processing-tools/seq-data-to-lane-bam.0.3.3.0/tools/seq-data-to-lane-bam		modules/raw.githubusercontent.com/icgc-argo-workflows/dna-seq-processing-tools/seq-data-to-lane-bam.0.3.3.0/tools/seq-data-to-lane-bam
rna-seq-alignment-wf		rna-seq-alignment-wf
scripts		scripts
test_data		test_data
wfpr_modules		wfpr_modules
.gitignore		.gitignore
.wfpm		.wfpm
LICENSE		LICENSE
LICENSE-short		LICENSE-short
README.md		README.md
example-params.local-qa.json		example-params.local-qa.json
example-params.rdpc-dev.json		example-params.rdpc-dev.json
example-params.rdpc-qa.json		example-params.rdpc-qa.json
main.nf		main.nf
nextflow.config		nextflow.config

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