Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Original file line number Diff line number Diff line change
Expand Up @@ -387,7 +387,7 @@ Additionally, our methods differ from GBD's in that we estimated two separate GA

2. Find and apply a second shift that replicates the preterm birth dichotomous effect when applied only to the portion of the distribution with baseline gestational age exposures that are *greater* than 32 (the very preterm birth threshold) *minus* this second shift. Note that the second shift will be negative in direction.

`The estimation of the antenatal supplementation gestational age shifts as described was performed in this notebook <https://github.com/ihmeuw/vivarium_research_nutrition_optimization/blob/data_prep/data_prep/antenatal_interventions/Gestational%20age%20shifts.ipynb>`_
`The estimation of the antenatal supplementation gestational age shifts as described was performed in this notebook <https://github.com/ihmeuw/vivarium_gates_mncnh/blob/2bb721ab7b99ca60e284a0a3a948e6504d639a6d/src/vivarium_gates_mncnh/data/ifa_mms_gestation_shifts/ifa_gestational_age_shifts.ipynb>`_

Assumptions and limitations
~~~~~~~~~~~~~~~~~~~~~~~~~~~
Expand Down Expand Up @@ -465,17 +465,15 @@ Where,
* - Parameter
- Value
* - IFA_SHIFT
- `Location-specific .csv files of IFA_SHIFT values can be found here <https://github.com/ihmeuw/vivarium_research_nutrition_optimization/tree/data_prep/data_prep/antenatal_interventions/ifa_gestational_age_shifts>`_
- `Location-specific IFA_SHIFT values can be found here <https://github.com/ihmeuw/vivarium_gates_mncnh/blob/2bb721ab7b99ca60e284a0a3a948e6504d639a6d/src/vivarium_gates_mncnh/data/ifa_mms_gestation_shifts/ifa_ga_shifts.csv>`_
* - MMS_SHIFT_1
- `Location-specific .csv files of MMS_SHIFT_1 values can be found here <https://github.com/ihmeuw/vivarium_research_nutrition_optimization/blob/data_prep/data_prep/antenatal_interventions/updated_mms_shifts.csv>`_
- `Location-specific .csv files of MMS_SHIFT_1 values can be found here <https://github.com/ihmeuw/vivarium_gates_mncnh/blob/2bb721ab7b99ca60e284a0a3a948e6504d639a6d/src/vivarium_gates_mncnh/data/ifa_mms_gestation_shifts/updated_mms_shifts.csv>`_
* - MMS_SHIFT_2
- `Location-specific .csv files of MMS_SHIFT_2 values can be found here <https://github.com/ihmeuw/vivarium_research_nutrition_optimization/blob/data_prep/data_prep/antenatal_interventions/updated_mms_shifts.csv>`_
- `Location-specific .csv files of MMS_SHIFT_2 values can be found here <https://github.com/ihmeuw/vivarium_gates_mncnh/blob/2bb721ab7b99ca60e284a0a3a948e6504d639a6d/src/vivarium_gates_mncnh/data/ifa_mms_gestation_shifts/updated_mms_shifts.csv>`_

.. todo::
.. todo::

These notebooks are outdated from the Nutrition Optimization project, so we need to update the above notebook links once we update to new GBD rounds
and to the locations of interest for the :ref:`MNCNH Portfolio <2024_concept_model_vivarium_mncnh_portfolio>` simulation.
Here is the relevant `JIRA ticket <https://jira.ihme.washington.edu/browse/SSCI-2209>`_.
The values in these CSVs rely on the GBD 2021 LBWSG exposure distribution and ANC1 covariates and therefore will need to be updated when the GBD 2023 estimates are available.

Verification and validation criteria
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Expand Down