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metaboWorkflows 0.9.0

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@jasenfinch jasenfinch released this 07 Oct 11:06
· 104 commits to master since this release
v0.9.0
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Learn about vigilant mode.

  • Added a NEWS.md file to track changes to the package.

  • A package website is now available at https://jasenfinch.github.io/metaboWorkflows/.

  • The package can now be used to firstly define a workflow and then generate a project template directory that facilitates reproducible analysis powered by the use of targets package, renv, git and docker.

  • A choice of workflow data inputs are now available that include file paths and converted data file retrieval from a grover web API.

  • Workflows can be defined using defineWorkflow() based the workflow input type and metabolomic technique, also enabling the selection of project template parameters.

  • Workflow definitions can be modified which is detailed in the Workflow customisation and extension vignette.

  • Project directories for workflow definitions can be generated using generateWorkflow().

  • The Introduction vignette has been updated to detail the new package functionality.

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