this project is still in early stages and undergoing testing. new issues and pull requests are welcome!
Visualization server built on the Flask microframework for inspecting time series data, motion correction results, and ROIs processed with the SIMA packages https://github.com/losonczylab/sima.
Copy config.py.tmpl to config.py, adjust the port number for flask to run on and execute run.py. For information on using Flask microframework see http://flask.pocoo.org/ or the tutorial at http://blog.miguelgrinberg.com/post/the-flask-mega-tutorial-part-i-hello-world
This program must have read permission on SIMA dataset sets to be inspected (and write permissions if used to save ROIs).
- sima
- flask