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Use Min and 90th percentile thresholds if fitting fails#9

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adamjtaylor wants to merge 5 commits intojmuhlich:mainfrom
adamjtaylor:duke-mibi
Open

Use Min and 90th percentile thresholds if fitting fails#9
adamjtaylor wants to merge 5 commits intojmuhlich:mainfrom
adamjtaylor:duke-mibi

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@adamjtaylor adamjtaylor commented Feb 22, 2022

  • Files with high contrast ratio, or some pre-processing to remove noise artefacts, such as HTAN MIBI data received from Duke, may fail the fitting process.
  • If this fails, using the min value and 90th percentile as vmin and vmax is seen to give relatively robust success.

Closes #8

0_0_0

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Elegantly set thresholds for empty channels

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