minimum changes to existing functions #229

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teng-gao merged 4 commits into kharchenkolab:main from lijin0303:main

Jun 3, 2025

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lijin0303 commented Jun 2, 2025

To accomodate the extended version of numbat, minimal changes made to:

/inst/bin/pileup_and_phase.R: parse UMI tag string
/R/main.R run_numbat() function: user-supplied gtf files

lijin0303 added 4 commits

June 2, 2025 17:26


          update readme

1d23961


          minimum changes

731dcaf


          change run_numbat

6e7dd31


          check gtf input

902ddd7

teng-gao merged commit 5d336be into kharchenkolab:main

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