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  1. mskcc/vcf2maf mskcc/vcf2maf Public

    Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

    Perl 401 220

  2. mskcc/ngs-filters mskcc/ngs-filters Public

    Filters for false-positive mutation calls in NGS

    R 34 21

  3. Variant-PostProcess Variant-PostProcess Public

    Forked from soccin/Variant-PostProcess

    Postprocessing scripts for CBE Variant Pipeline

    Python

  4. soccin/FixMultiInDel soccin/FixMultiInDel Public

    Fix the multiallelic indels from haplotypecaller to deal with bug with overlapping in/dels

    Shell

  5. soccin/Variant-PostProcess soccin/Variant-PostProcess Public

    Postprocessing scripts for CBE Variant Pipeline

    Shell 1