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11 changes: 11 additions & 0 deletions .project
Original file line number Diff line number Diff line change
@@ -0,0 +1,11 @@
<?xml version="1.0" encoding="UTF-8"?>
<projectDescription>
<name>knip-ilastik</name>
<comment></comment>
<projects>
</projects>
<buildSpec>
</buildSpec>
<natures>
</natures>
</projectDescription>
8 changes: 6 additions & 2 deletions org.knime.knip.ilastik/.classpath
Original file line number Diff line number Diff line change
@@ -1,8 +1,12 @@
<?xml version="1.0" encoding="UTF-8"?>
<classpath>
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.8"/>
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-21">
<attributes>
<attribute name="module" value="true"/>
</attributes>
</classpathentry>
<classpathentry kind="con" path="org.eclipse.pde.core.requiredPlugins"/>
<classpathentry kind="src" path="src/"/>
<classpathentry kind="src" path="src"/>
<classpathentry exported="true" kind="lib" path="lib/cisd-jhdf5-batteries_included_lin_win_mac.jar" sourcepath="lib/cisd-jhdf5-src.zip"/>
<classpathentry exported="true" kind="lib" path="lib/javax.json-api-1.0.jar" sourcepath="lib/javax.json-api-1.0.jar"/>
<classpathentry exported="true" kind="lib" path="lib/javax.json-1.0.3.jar"/>
Expand Down
37 changes: 30 additions & 7 deletions org.knime.knip.ilastik/.settings/org.eclipse.jdt.core.prefs
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
eclipse.preferences.version=1
org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled
org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.8
org.eclipse.jdt.core.compiler.codegen.targetPlatform=21
org.eclipse.jdt.core.compiler.codegen.unusedLocal=preserve
org.eclipse.jdt.core.compiler.compliance=1.8
org.eclipse.jdt.core.compiler.compliance=21
org.eclipse.jdt.core.compiler.debug.lineNumber=generate
org.eclipse.jdt.core.compiler.debug.localVariable=generate
org.eclipse.jdt.core.compiler.debug.sourceFile=generate
Expand All @@ -17,6 +17,7 @@ org.eclipse.jdt.core.compiler.problem.deprecationInDeprecatedCode=disabled
org.eclipse.jdt.core.compiler.problem.deprecationWhenOverridingDeprecatedMethod=enabled
org.eclipse.jdt.core.compiler.problem.discouragedReference=warning
org.eclipse.jdt.core.compiler.problem.emptyStatement=warning
org.eclipse.jdt.core.compiler.problem.enablePreviewFeatures=disabled
org.eclipse.jdt.core.compiler.problem.enumIdentifier=error
org.eclipse.jdt.core.compiler.problem.fallthroughCase=ignore
org.eclipse.jdt.core.compiler.problem.fatalOptionalError=disabled
Expand Down Expand Up @@ -59,6 +60,7 @@ org.eclipse.jdt.core.compiler.problem.potentialNullReference=warning
org.eclipse.jdt.core.compiler.problem.rawTypeReference=warning
org.eclipse.jdt.core.compiler.problem.redundantNullCheck=warning
org.eclipse.jdt.core.compiler.problem.redundantSuperinterface=warning
org.eclipse.jdt.core.compiler.problem.reportPreviewFeatures=warning
org.eclipse.jdt.core.compiler.problem.specialParameterHidingField=enabled
org.eclipse.jdt.core.compiler.problem.staticAccessReceiver=warning
org.eclipse.jdt.core.compiler.problem.suppressOptionalErrors=disabled
Expand Down Expand Up @@ -86,25 +88,30 @@ org.eclipse.jdt.core.compiler.problem.unusedParameterWhenOverridingConcrete=disa
org.eclipse.jdt.core.compiler.problem.unusedPrivateMember=warning
org.eclipse.jdt.core.compiler.problem.unusedWarningToken=warning
org.eclipse.jdt.core.compiler.problem.varargsArgumentNeedCast=warning
org.eclipse.jdt.core.compiler.source=1.8
org.eclipse.jdt.core.compiler.release=enabled
org.eclipse.jdt.core.compiler.source=21
org.eclipse.jdt.core.formatter.align_type_members_on_columns=false
org.eclipse.jdt.core.formatter.alignment_for_additive_operator=16
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_allocation_expression=16
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_annotation=16
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_enum_constant=16
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_explicit_constructor_call=16
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_method_invocation=18
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_qualified_allocation_expression=16
org.eclipse.jdt.core.formatter.alignment_for_assignment=16
org.eclipse.jdt.core.formatter.alignment_for_binary_expression=16
org.eclipse.jdt.core.formatter.alignment_for_bitwise_operator=16
org.eclipse.jdt.core.formatter.alignment_for_compact_if=16
org.eclipse.jdt.core.formatter.alignment_for_conditional_expression=16
org.eclipse.jdt.core.formatter.alignment_for_enum_constants=16
org.eclipse.jdt.core.formatter.alignment_for_expressions_in_array_initializer=16
org.eclipse.jdt.core.formatter.alignment_for_logical_operator=16
org.eclipse.jdt.core.formatter.alignment_for_method_declaration=18
org.eclipse.jdt.core.formatter.alignment_for_multiple_fields=16
org.eclipse.jdt.core.formatter.alignment_for_multiplicative_operator=16
org.eclipse.jdt.core.formatter.alignment_for_parameters_in_constructor_declaration=18
org.eclipse.jdt.core.formatter.alignment_for_parameters_in_method_declaration=18
org.eclipse.jdt.core.formatter.alignment_for_selector_in_method_invocation=16
org.eclipse.jdt.core.formatter.alignment_for_string_concatenation=16
org.eclipse.jdt.core.formatter.alignment_for_superclass_in_type_declaration=16
org.eclipse.jdt.core.formatter.alignment_for_superinterfaces_in_enum_declaration=16
org.eclipse.jdt.core.formatter.alignment_for_superinterfaces_in_type_declaration=16
Expand Down Expand Up @@ -186,11 +193,12 @@ org.eclipse.jdt.core.formatter.insert_new_line_in_empty_enum_constant=insert
org.eclipse.jdt.core.formatter.insert_new_line_in_empty_enum_declaration=insert
org.eclipse.jdt.core.formatter.insert_new_line_in_empty_method_body=insert
org.eclipse.jdt.core.formatter.insert_new_line_in_empty_type_declaration=insert
org.eclipse.jdt.core.formatter.insert_space_after_additive_operator=insert
org.eclipse.jdt.core.formatter.insert_space_after_and_in_type_parameter=insert
org.eclipse.jdt.core.formatter.insert_space_after_assignment_operator=insert
org.eclipse.jdt.core.formatter.insert_space_after_at_in_annotation=do not insert
org.eclipse.jdt.core.formatter.insert_space_after_at_in_annotation_type_declaration=do not insert
org.eclipse.jdt.core.formatter.insert_space_after_binary_operator=insert
org.eclipse.jdt.core.formatter.insert_space_after_bitwise_operator=insert
org.eclipse.jdt.core.formatter.insert_space_after_closing_angle_bracket_in_type_arguments=insert
org.eclipse.jdt.core.formatter.insert_space_after_closing_angle_bracket_in_type_parameters=insert
org.eclipse.jdt.core.formatter.insert_space_after_closing_brace_in_block=insert
Expand Down Expand Up @@ -220,6 +228,8 @@ org.eclipse.jdt.core.formatter.insert_space_after_comma_in_superinterfaces=inser
org.eclipse.jdt.core.formatter.insert_space_after_comma_in_type_arguments=insert
org.eclipse.jdt.core.formatter.insert_space_after_comma_in_type_parameters=insert
org.eclipse.jdt.core.formatter.insert_space_after_ellipsis=insert
org.eclipse.jdt.core.formatter.insert_space_after_logical_operator=insert
org.eclipse.jdt.core.formatter.insert_space_after_multiplicative_operator=insert
org.eclipse.jdt.core.formatter.insert_space_after_opening_angle_bracket_in_parameterized_type_reference=do not insert
org.eclipse.jdt.core.formatter.insert_space_after_opening_angle_bracket_in_type_arguments=do not insert
org.eclipse.jdt.core.formatter.insert_space_after_opening_angle_bracket_in_type_parameters=do not insert
Expand All @@ -243,12 +253,16 @@ org.eclipse.jdt.core.formatter.insert_space_after_postfix_operator=do not insert
org.eclipse.jdt.core.formatter.insert_space_after_prefix_operator=do not insert
org.eclipse.jdt.core.formatter.insert_space_after_question_in_conditional=insert
org.eclipse.jdt.core.formatter.insert_space_after_question_in_wildcard=do not insert
org.eclipse.jdt.core.formatter.insert_space_after_relational_operator=insert
org.eclipse.jdt.core.formatter.insert_space_after_semicolon_in_for=insert
org.eclipse.jdt.core.formatter.insert_space_after_shift_operator=insert
org.eclipse.jdt.core.formatter.insert_space_after_string_concatenation=insert
org.eclipse.jdt.core.formatter.insert_space_after_unary_operator=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_additive_operator=insert
org.eclipse.jdt.core.formatter.insert_space_before_and_in_type_parameter=insert
org.eclipse.jdt.core.formatter.insert_space_before_assignment_operator=insert
org.eclipse.jdt.core.formatter.insert_space_before_at_in_annotation_type_declaration=insert
org.eclipse.jdt.core.formatter.insert_space_before_binary_operator=insert
org.eclipse.jdt.core.formatter.insert_space_before_bitwise_operator=insert
org.eclipse.jdt.core.formatter.insert_space_before_closing_angle_bracket_in_parameterized_type_reference=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_closing_angle_bracket_in_type_arguments=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_closing_angle_bracket_in_type_parameters=do not insert
Expand Down Expand Up @@ -294,6 +308,8 @@ org.eclipse.jdt.core.formatter.insert_space_before_comma_in_superinterfaces=do n
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_type_arguments=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_type_parameters=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_ellipsis=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_logical_operator=insert
org.eclipse.jdt.core.formatter.insert_space_before_multiplicative_operator=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_angle_bracket_in_parameterized_type_reference=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_angle_bracket_in_type_arguments=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_angle_bracket_in_type_parameters=do not insert
Expand Down Expand Up @@ -329,8 +345,11 @@ org.eclipse.jdt.core.formatter.insert_space_before_postfix_operator=do not inser
org.eclipse.jdt.core.formatter.insert_space_before_prefix_operator=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_question_in_conditional=insert
org.eclipse.jdt.core.formatter.insert_space_before_question_in_wildcard=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_relational_operator=insert
org.eclipse.jdt.core.formatter.insert_space_before_semicolon=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_semicolon_in_for=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_shift_operator=insert
org.eclipse.jdt.core.formatter.insert_space_before_string_concatenation=insert
org.eclipse.jdt.core.formatter.insert_space_before_unary_operator=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_brackets_in_array_type_reference=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_empty_braces_in_array_initializer=do not insert
Expand All @@ -356,5 +375,9 @@ org.eclipse.jdt.core.formatter.tabulation.char=space
org.eclipse.jdt.core.formatter.tabulation.size=4
org.eclipse.jdt.core.formatter.use_on_off_tags=false
org.eclipse.jdt.core.formatter.use_tabs_only_for_leading_indentations=false
org.eclipse.jdt.core.formatter.wrap_before_binary_operator=true
org.eclipse.jdt.core.formatter.wrap_before_additive_operator=true
org.eclipse.jdt.core.formatter.wrap_before_bitwise_operator=true
org.eclipse.jdt.core.formatter.wrap_before_logical_operator=true
org.eclipse.jdt.core.formatter.wrap_before_multiplicative_operator=true
org.eclipse.jdt.core.formatter.wrap_before_string_concatenation=true
org.eclipse.jdt.core.formatter.wrap_outer_expressions_when_nested=true
2 changes: 1 addition & 1 deletion org.knime.knip.ilastik/META-INF/MANIFEST.MF
Original file line number Diff line number Diff line change
Expand Up @@ -18,5 +18,5 @@ Require-Bundle: org.knime.base;bundle-version="[3.0.0,6.0.0)",
scifio;bundle-version="0.25.0",
org.knime.knip.core;bundle-version="[1.5.0,2.0.0)",
scijava-common;bundle-version="2.47.0"
Bundle-RequiredExecutionEnvironment: JavaSE-1.8
Bundle-RequiredExecutionEnvironment: JavaSE-21
Bundle-ActivationPolicy: lazy
20 changes: 12 additions & 8 deletions pom.xml
Original file line number Diff line number Diff line change
Expand Up @@ -12,11 +12,14 @@
<properties>
<revision>1.0.0</revision>
<changelist>-SNAPSHOT</changelist>
<knime.version>5.1</knime.version>
<tycho.version>2.7.5</tycho.version>
<knime.version>nightly</knime.version>
<tycho.version>4.0.13</tycho.version>
<tycho.extras.version>${tycho.version}</tycho.extras.version>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
<maven.compiler.source>21</maven.compiler.source>
<maven.compiler.target>21</maven.compiler.target>
<maven.compiler.release>21</maven.compiler.release>
</properties>

<!-- List the modules of your project here -->
Expand Down Expand Up @@ -82,7 +85,7 @@
</configuration>
</plugin>
<plugin>
<groupId>org.eclipse.tycho.extras</groupId>
<groupId>org.eclipse.tycho</groupId>
<artifactId>tycho-buildtimestamp-jgit</artifactId>
<version>${tycho.extras.version}</version>
</plugin>
Expand Down Expand Up @@ -133,14 +136,14 @@

<!-- This plugin configuration block is only needed if the repository contains plug-ins that don't have any sources. If it is omitted
Tycho will complain. -->
<groupId>org.eclipse.tycho.extras</groupId>
<artifactId>tycho-source-feature-plugin</artifactId>
<groupId>org.eclipse.tycho</groupId>
<artifactId>tycho-source-plugin</artifactId>
<executions>
<execution>
<id>source-feature</id>
<id>feature-source</id>
<phase>package</phase>
<goals>
<goal>source-feature</goal>
<goal>feature-source</goal>
</goals>
</execution>
</executions>
Expand All @@ -161,7 +164,7 @@
<artifactId>tycho-packaging-plugin</artifactId>
<dependencies>
<dependency>
<groupId>org.eclipse.tycho.extras</groupId>
<groupId>org.eclipse.tycho</groupId>
<artifactId>tycho-buildtimestamp-jgit</artifactId>
<version>${tycho.extras.version}</version>
</dependency>
Expand All @@ -187,6 +190,7 @@
<groupId>org.eclipse.tycho</groupId>
<artifactId>target-platform-configuration</artifactId>
<configuration>
<executionEnvironment>JavaSE-21</executionEnvironment>
<environments>
<!-- These can be removed once we shut down the Buckminster build -->
<environment>
Expand Down