v0.2.0

What's Changed

New features

• Transition from calculating depth with samtools depth to mosdepth
• Add WhatsHap stats
• Add pb-CpG-tools

Other changes

• Filter out RefCall variants in DeepVariant SNP/indel vcf file
• Significantly simplify code by removing publish rules
• Remove multiple pipeface_settings.txt files for simplicity
• Add more walltime to SNV VEP
• Minor fixes/changes to documentation

Full breakdown

• Release v0.2.0 by @leahkemp in #19
• Full Changelog: v0.1.2...v0.2.0