Search results

1.9 TB is insufficient memory for whole genome alignment between two 5 GB genomes.

Status: Open.

#1272 In lh3/minimap2;

· altuffin opened on Jan 22, 2025

split reference genome alignment would be in consistence with aligning it as a whole?

split-prefix

Status: Open.

#1270 In lh3/minimap2;

· Alipha-Clisa opened on Jan 13, 2025

Mappy on MacOS arm_neon.h error

help wanted

Status: Open.

#1235 In lh3/minimap2;

· christopher-vollmers opened on Aug 15, 2024

Question about different mappings of same read

more info needed

Status: Open.

#1200 In lh3/minimap2;

· nadjano opened on Apr 24, 2024

Mappy segfault with long sequence and MD=True

bug

Status: Open.

#1183 In lh3/minimap2;

· davidnewman02 opened on Mar 25, 2024

Chaining score contributions from anchors seem to be capped by the anchor length, but the paper doesn't explain why

question

Status: Open.

#1125 In lh3/minimap2;

· adamnovak opened on Oct 24, 2023

Order of operations in CIGAR

enhancement

Status: Open.

#1118 In lh3/minimap2;

· baraaorabi opened on Sep 27, 2023

Single base exon in splice alignment

Status: Open.

#1099 In lh3/minimap2;

· baraaorabi opened on Aug 8, 2023

How to solve logic inconsistency?

split-prefix

Status: Open.

#1084 In lh3/minimap2;

· Keltonc opened on Jul 9, 2023

Segmentation fault (core dumped)

split-prefix

Status: Open.

#1081 In lh3/minimap2;

· Maxwell-codesome opened on Jul 6, 2023

bug? hit.c:210: mm_hit_sort: Assertion `has_cigar + no_cigar == 1' failed.

split-prefix

Status: Open.

#1067 In lh3/minimap2;

· dgordon562 opened on May 26, 2023

split-prefix and write_sam_cigar problems

split-prefix

Status: Open.

#1058 In lh3/minimap2;

· evgenyleushkin opened on May 2, 2023