lsst-dm · ameisner · Feb 11, 2025 · Feb 10, 2025 · Feb 10, 2025 · Feb 10, 2025
diff --git a/.github/CODE_OF_CONDUCT b/.github/CODE_OF_CONDUCT
diff --git a/.github/CONTRIBUTING.md b/.github/CONTRIBUTING.md
diff --git a/.github/dependabot.yml b/.github/dependabot.yml
diff --git a/.github/workflows/ci.yaml b/.github/workflows/ci.yaml
@@ -82,22 +82,6 @@ jobs:
           # tox-envs: "docs,docs-linkcheck"
           tox-plugins: tox-uv
 
-      # Only attempt documentation uploads for tagged releases and pull
-      # requests from ticket branches in the same repository.  This avoids
-      # version clutter in the docs and failures when a PR doesn't have access
-      # to secrets.
-      - name: Upload to LSST the Docs
-        uses: lsst-sqre/ltd-upload@v1
-        with:
-          project: "rubin_rag"
-          dir: "docs/_build/html"
-          username: ${{ secrets.LTD_USERNAME }}
-          password: ${{ secrets.LTD_PASSWORD }}
-        if: >
-          github.event_name != 'merge_group'
-          && (github.event_name != 'pull_request'
-              || startsWith(github.head_ref, 'tickets/'))
-
   test-packaging:
 
     name: Test packaging

diff --git a/.ts_pre_commit_config.yaml b/.ts_pre_commit_config.yaml
@@ -0,0 +1,6 @@
+check-yaml: true
+check-xml: true
+black: true
+flake8: true
+isort: true
+mypy: true
diff --git a/COPYRIGHT b/COPYRIGHT
@@ -0,0 +1,2 @@
+Copyright 2023 Association of Universities for Research in Astronomy, Inc. (AURA)
+Copyright 2023 The Board of Trustees of the Leland Stanford Junior University, through SLAC National Accelerator Laboratory
diff --git a/docs/api.rst b/docs/api.rst
@@ -1,8 +1,8 @@
-:og:description: Comprehensive API documentation for rubinrag.
+:og:description: Comprehensive API documentation for rubin.rag.
 
 ####################
 Python API reference
 ####################
 
-.. automodapi:: rubinrag
+.. automodapi:: rubin.rag
    :include-all-objects:
diff --git a/docs/dev/development.rst → docs/developer-guide/development.rst b/docs/dev/development.rst → docs/developer-guide/development.rst
diff --git a/docs/dev/index.rst → docs/developer-guide/index.rst b/docs/dev/index.rst → docs/developer-guide/index.rst
diff --git a/docs/dev/release.rst → docs/developer-guide/release.rst b/docs/dev/release.rst → docs/developer-guide/release.rst
diff --git a/docs/index.rst b/docs/index.rst
@@ -21,4 +21,4 @@ rubin_rag is developed on GitHub at https://github.com/lsst-dm/rubin_rag.
    User guide <user-guide/index>
    API <api>
    Change log <changelog>
-   Contributing <dev/index>
+   Contributing <developer-guide/index>
diff --git a/pyproject.toml b/pyproject.toml
@@ -52,8 +52,8 @@ build-backend = "setuptools.build_meta"
 
 [tool.setuptools.packages.find]
 # https://setuptools.pypa.io/en/latest/userguide/pyproject_config.html
-where = ["src"]
-include = ["rubinrag*"]
+where = ["python"]
+include = ["rubin"]
 
 [tool.black]
 line-length = 79
@@ -62,10 +62,10 @@ target-version = ["py312"]
 [tool.coverage.run]
 parallel = true
 branch = true
-source = ["rubinrag"]
+source = ["rubin"]
 
 [tool.coverage.paths]
-source = ["src", ".tox/*/site-packages"]
+source = ["python", ".tox/*/site-packages"]
 
 [tool.coverage.report]
 show_missing = true
@@ -116,7 +116,7 @@ python_files = ["tests/*.py", "tests/*/*.py"]
 extend = "ruff-shared.toml"
 
 [tool.ruff.lint.isort]
-known-first-party = ["rubinrag", "tests"]
+known-first-party = ["rubin.rag", "tests"]
 split-on-trailing-comma = false
 
 [tool.scriv]

diff --git a/python/rubin/__init__.py b/python/rubin/__init__.py
@@ -0,0 +1,5 @@
+"""pkgutil-style namespace package."""
+
+import pkgutil
+
+__path__ = pkgutil.extend_path(__path__, __name__)
diff --git a/src/rubinrag/__init__.py → python/rubin/rag/__init__.py b/src/rubinrag/__init__.py → python/rubin/rag/__init__.py
@@ -1,16 +1,16 @@
-"""Rubin RAG-basd LLM Application"""
+"""Rubin RAG-basd LLM Application."""
 
 __all__ = ["__version__"]
 
 from importlib.metadata import PackageNotFoundError, version
 
 __version__: str
-"""The version string of rubinrag
+"""The version string of rubin.rag
 (PEP 440 / SemVer compatible).
 """
 
 try:
     __version__ = version(__name__)
 except PackageNotFoundError:
     # package is not installed
-    __version__ = "0.0.0"
+    __version__ = "0.0.1"
diff --git a/ruff-shared.toml b/ruff-shared.toml
@@ -96,10 +96,10 @@ select = ["ALL"]
 "noxfile.py" = [
     "T201",    # print makes sense as output from nox rules
 ]
-"src/*/handlers/**" = [
+"python/*/handlers/**" = [
     "D103",    # FastAPI handlers should not have docstrings
 ]
-"*/src/*/handlers/**" = [
+"*/python/*/handlers/**" = [
     "D103",    # FastAPI handlers should not have docstrings
 ]
 "tests/**" = [

diff --git a/setup.cfg b/setup.cfg
@@ -0,0 +1,10 @@
+[flake8]
+max-line-length = 110
+max-doc-length = 79
+ignore = E133, E226, E228, N802, N803, N806, N812, N813, N815, N816, W503
+exclude =
+  bin,
+  doc,
+  **/*/__init__.py,
+  **/*/version.py,
+  tests/.tests
diff --git a/setup.py b/setup.py
@@ -0,0 +1,6 @@
+"""Python setup."""
+
+import setuptools
+import setuptools_scm
+
+setuptools.setup(version=setuptools_scm.get_version())
diff --git a/src/rubinrag/py.typed b/src/rubinrag/py.typed
diff --git a/tests/version_test.py b/tests/version_test.py
@@ -2,7 +2,7 @@
 
 from __future__ import annotations
 
-from rubinrag import __version__
+from rubin.rag import __version__
 
 
 def test_version() -> None:

diff --git a/tox.ini b/tox.ini
@@ -25,7 +25,7 @@ commands =
 [testenv:typing]
 description = Run mypy.
 commands =
-    mypy src/rubinrag tests
+    mypy python/rubin tests
 
 [testenv:lint]
 description = Lint codebase by running pre-commit (Black, isort, Flake8).
Original file line number	Diff line number	Diff line change
		@@ -0,0 +1,2 @@
		Copyright 2023 Association of Universities for Research in Astronomy, Inc. (AURA)
		Copyright 2023 The Board of Trustees of the Leland Stanford Junior University, through SLAC National Accelerator Laboratory