DNA Methylation • RNA-seq • Proteomics • Multi-Omics Integration
📍 Australia • 📧 mandhri.abeysooriya@gmail.com • 🔗 LinkedIn
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PhD in Bioinformatics & Biostatistics (Deakin, 2025) | M.Sc. Bioinformatics I'm a bioinformatician passionate about extracting biological meaning from large, complex genomic datasets. I specialise in designing and executing end-to-end analysis workflows across DNA methylation, bulk RNA-seq, proteomics, and metabolomics, with a focus on identifying robust molecular signatures in heterogeneous populations. I mostly work in R and Bash for reproducible bioinformatics workflows. Recently, I'm shifting more into Python and AI engineering to build scalable analysis tools and automation. |
| Project | What it is | Tools |
|---|---|---|
| DNA Methylation / EWAS | QC, filtering, batch correction, EWAS/DMRs, pathway enrichment analysis interpretation | R, python, bash |
| Bulk RNA-seq Pipelines | FASTQ → QC → alignment/quant → DE → reporting | Snakemake / Nextflow, R |
| Proteomics + Metabolomics | Differential analysis, missingness-aware workflows, pathway enrichment analysis | R, python |
| Multi-omics Integration | Harmonising omics layers for robust signatures/subtypes | R, HPC, Bash |
