Conley Morse Graph Database
This project uses combinatorial and topological methods to compute dynamics of discrete dynamical systems.
Install the latest tagged version:
pip install CMGDB
To uninstall:
pip uninstall CMGDB
To get started on how to run the code see the examples in the Jupyter notebooks in the examples folder.
In particular the notebooks Examples.ipynb, Gaussian_Process_Example.ipynb, and Conley_Index_Examples.ipynb present basic examples on how to run the code and are a good starting point.
Here is an old survey and a talk that might be useful.
To install from source you need a C++ compiler and the following dependencies installed: Boost, GMP, and the Succinct Data Structure Library (SDSL). Assuming you have these dependencies installed in your system, you can install from source with the command:
pip install --force-reinstall --no-deps --no-cache-dir git+https://github.com/marciogameiro/CMGDB.git
Alternatively, you can clone the GitHub repository and install with:
git clone https://github.com/marciogameiro/CMGDB.git
cd CMGDB
./install.sh