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New functions and vignettes#71

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wevertonbio merged 17 commits intomarlonecobos:mainfrom
wevertonbio:main
Jul 19, 2025
Merged

New functions and vignettes#71
wevertonbio merged 17 commits intomarlonecobos:mainfrom
wevertonbio:main

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  • Use fPROC::auc_metrics() to calculate pROC.
  • Implement new partition methods: kfolds, subsample, bootstrap and leave-one-out.
  • Update all data (prepared_datas, calibration_results and fitted_models) to match new partition methods.
  • Document example datasets.
  • New vignette explaining how to explore model uncertainty and variability.
  • color_for_changes(): new function for setting colors for change maps. Function used and detailed in the vignettes.
  • organize_for_projection(): new function to manually organize and structure variables for past and future projections
  • New vignette explaining how to use the organize_for_projection function.
  • Add CHELSA LGM variables to inst/extdata for vignette examples.
  • Add option in MOP to fill in-range areas with zeros instead of NAs
  • Fix error when subsetting scenarios in import_projections() and add option to import mop distance.
  • Include example data and detailed guidance in prepare_data vignette on using data partitions with spatial blocks generated by external packages (ENMeval and flexsdm)
  • Remove unused data objects: calib_results and sp_swd_cat.
  • Minor changes in some examples to reduce testing time from over 5 seconds to under 5 seconds
  • Fix links in vignettes
  • Update website

…s) and examples to match results with new partition methods
…ure variables for past and future projections
…n using data partitions with spatial blocks generated by ENMeval or flexsdm packages
@wevertonbio wevertonbio merged commit 28f0783 into marlonecobos:main Jul 19, 2025
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