This repository contains an implementation of the model presented in Sætra MJ, Mori Y (2024) An electrodiffusive network model with multicompartmental neurons and synaptic connections, PLoS Comput Biol 20(11): e1012114.
Clone or download the repo, navigate to the top directory of the repo and enter the following command in the terminal:
pip3 install -e .The code was developed for Python 3.10.
The example folder includes example code showing how to run simulations.