Add DataFrame support and configuration updates

.github/workflows/continuous_integration.yaml

@@ -1,20 +1,17 @@
 name: Continuous Integration
 
 on:
-  push:
-    tags-ignore: ['*']
-    branches:
-      - '**'
-    paths-ignore:
-      - '**/*.md'
   pull_request:
     branches:
       - main
     paths-ignore:
       - '**/*.md'
+      - '**/*.yaml'
+      - '**/*.yml'
+      - '**/*.toml'
 
 env:
-  POETRY_VERSION: 2.0.0
+  UV_VERSION: 0.7.7
 
 jobs:
     lint_and_type_check:
@@ -29,19 +26,19 @@ jobs:
           with:
             python-version: "3.9"
 
-        - name: Install Poetry
+        - name: Install UV
           run: |
-            curl -sSL https://install.python-poetry.org | python3 - --version ${{ env.POETRY_VERSION }}
-            echo "$HOME/.local/bin" >> $GITHUB_PATH
+            curl -LsSf "https://astral.sh/uv/${{ env.UV_VERSION }}/install.sh" | sh
 
         - name: Install dependencies
-          run: poetry install --no-interaction
+          run: uv sync
 
         - name: Run ruff
-          run: poetry run ruff check snappylapy  --output-format=github
+          run: uv run ruff check snappylapy  --output-format=github
 
         - name: Run mypy
-          run: poetry run mypy snappylapy
+          if: always()
+          run: uv run mypy snappylapy
 
     test:
         runs-on: ubuntu-latest
@@ -59,13 +56,30 @@ jobs:
           with:
             python-version: ${{ matrix.python-version }}
 
-        - name: Install Poetry
+        - name: Install UV
           run: |
-            curl -sSL https://install.python-poetry.org | python3 - --version ${{ env.POETRY_VERSION }}
-            echo "$HOME/.local/bin" >> $GITHUB_PATH
+            curl -LsSf "https://astral.sh/uv/${{ env.UV_VERSION }}/install.sh" | sh
 
         - name: Install dependencies
-          run: poetry install --no-interaction
+          run: uv sync
 
         - name: Run tests
-          run: poetry run pytest tests/
+          run: uv run pytest tests/ --junit-xml=test-results.xml
+
+        - name: Surface failing tests
+          if: always()
+          uses: pmeier/pytest-results-action@main
+          with:
+            # A list of JUnit XML files, directories containing the former, and wildcard
+            # patterns to process.
+            # See @actions/glob for supported patterns.
+            path: test-results.xml
+
+            # (Optional) Add a summary of the results at the top of the report
+            summary: true
+
+            # (Optional) Fail the workflow if no JUnit XML was found.
+            fail-on-empty: true
+
+            # (Optional) Title of the test results section in the workflow summary
+            title: Test results

.github/workflows/mkdocs.yaml

@@ -9,6 +9,9 @@ on:
       - "[0-9]+\\.[0-9]+\\.[0-9]+b[0-9]+"
       - "[0-9]+\\.[0-9]+\\.[0-9]+rc[0-9]+"
 
+env:
+  UV_VERSION: 0.7.7
+
 # Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages
 permissions:
   contents: read
@@ -43,19 +46,16 @@ jobs:
         with:
           python-version: '3.9'
 
-      # Install dependencies using Poetry
-      - uses: Gr1N/setup-poetry@v9
-      - uses: actions/cache@v4
-        with:
-            path: ~/.cache/pypoetry/virtualenvs
-            key: ${{ runner.os }}-poetry-${{ hashFiles('poetry.lock') }}
-      - run: poetry --version
-      - run: poetry install
+      # Install dependencies using UV
+      - name: Install UV
+        id: uv
+        run: |
+          curl -LsSf "https://astral.sh/uv/${{ env.UV_VERSION }}/install.sh" | sh
 
       # Build documentation to ./site/ directory
       - name: Build Documentation
         id: build
-        run: poetry run mkdocs build
+        run: uv run mkdocs build
 
       # Upload artifact from the ./site/ directory using the expected format for GitHub Pages
       - name: Upload Artifact

.github/workflows/release.yaml

@@ -10,7 +10,7 @@ on:
 
 env:
   PACKAGE_NAME: "snappylapy"
-  POETRY_VERSION: 2.0.0
+  UV_VERSION: 0.7.7
 
 jobs:
   details:
@@ -76,21 +76,20 @@ jobs:
         with:
           python-version: "3.12"
 
-      - name: Install Poetry
+      - name: Install UV
         run: |
-          curl -sSL https://install.python-poetry.org | python3 - --version ${{ env.POETRY_VERSION }}
-          echo "$HOME/.local/bin" >> $GITHUB_PATH
+          curl -LsSf "https://astral.sh/uv/${{ env.UV_VERSION }}/install.sh" | sh
 
-      - name: Set project version with Poetry
-        run: |
-          poetry version ${{ needs.details.outputs.new_version }}
+      # - name: Set project version with Poetry
+      #   run: |
+      #     poetry version ${{ needs.details.outputs.new_version }}
 
-      - name: Install dependencies
-        run: poetry install --sync --no-interaction
+      # - name: Install dependencies
+      #   run: poetry install --sync --no-interaction
 
       - name: Build source and wheel distribution
         run: |
-          poetry build
+          uv build
 
       - name: Upload artifacts
         uses: actions/upload-artifact@v4

.gitignore

@@ -1,3 +1,6 @@
+# Ignore test results from snappylapy
+__test_results__/
+
 # Byte-compiled / optimized / DLL files
 __pycache__/
 *.py[cod]

.python-version

@@ -0,0 +1 @@
+3.9

.vscode/settings.json

@@ -3,5 +3,11 @@
         "tests"
     ],
     "python.testing.unittestEnabled": false,
-    "python.testing.pytestEnabled": true
+    "python.testing.pytestEnabled": true,
+    "[python]": {
+        "editor.rulers": [
+            88,
+            120
+        ]
+}
 }

__snapshots__/[test_snappylappy_new][test_snapshot_bytes][bytes_snapshot].bytes.txt

@@ -0,0 +1 @@
+Hello World

__snapshots__/[test_snappylappy_new][test_snapshot_dict].dict.json

@@ -0,0 +1,4 @@
+{
+  "name": "John Doe",
+  "age": 31
+}

__snapshots__/[test_snappylappy_new][test_snapshot_json_bytes][json_bytes_snapshot].bytes.txt

@@ -0,0 +1 @@
+{"name": "John Doe", "age": 31}

__snapshots__/[test_snappylappy_new][test_snapshot_list].list.json

@@ -0,0 +1,4 @@
+[
+  "John Doe",
+  31
+]

__snapshots__/[test_snappylappy_new][test_snapshot_multiple_assertions].dict.json

@@ -0,0 +1,4 @@
+{
+  "name": "John Doe",
+  "age": 31
+}

__snapshots__/[test_snappylappy_new][test_snapshot_multiple_assertions].string.txt

@@ -0,0 +1 @@
+Hello World

__snapshots__/[test_snappylappy_new][test_snapshot_multiple_folders_pytest_parametrize][case1].string.txt

@@ -0,0 +1 @@
+Hello World

__snapshots__/[test_snappylappy_new][test_snapshot_multiple_folders_pytest_parametrize][case2].string.txt

@@ -0,0 +1 @@
+Hello World

__snapshots__/[test_snappylappy_new][test_snapshot_parametrized][Hello Galaxy].string.txt

@@ -0,0 +1 @@
+Hello Galaxy

__snapshots__/[test_snappylappy_new][test_snapshot_parametrized][Hello Universe].string.txt

@@ -0,0 +1 @@
+Hello Universe

__snapshots__/[test_snappylappy_new][test_snapshot_parametrized][Hello World].string.txt

@@ -0,0 +1 @@
+Hello World

__snapshots__/[test_snappylappy_new][test_snapshot_python_code][python_code_snapshot].py

@@ -0,0 +1 @@
+print('Hello World')

__snapshots__/[test_snappylappy_new][test_snapshot_string].string.txt

@@ -0,0 +1 @@
+Hello World

custom_dir/__snapshots__/[test_snappylappy_new][test_snapshot_with_custom_directories].string.txt

@@ -0,0 +1 @@
+Hello World

custom_dir/__snapshots__/[test_snappylappy_new][test_snapshot_with_custom_directories][].string.txt

@@ -0,0 +1 @@
+Hello World